Progesterone

Details

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Internal ID ce160985-4f69-4c40-b05e-df0c91636007
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Pregnane steroids > Gluco/mineralocorticoids, progestogins and derivatives
IUPAC Name (8S,9S,10R,13S,14S,17S)-17-acetyl-10,13-dimethyl-1,2,6,7,8,9,11,12,14,15,16,17-dodecahydrocyclopenta[a]phenanthren-3-one
SMILES (Canonical) CC(=O)C1CCC2C1(CCC3C2CCC4=CC(=O)CCC34C)C
SMILES (Isomeric) CC(=O)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CCC4=CC(=O)CC[C@]34C)C
InChI InChI=1S/C21H30O2/c1-13(22)17-6-7-18-16-5-4-14-12-15(23)8-10-20(14,2)19(16)9-11-21(17,18)3/h12,16-19H,4-11H2,1-3H3/t16-,17+,18-,19-,20-,21+/m0/s1
InChI Key RJKFOVLPORLFTN-LEKSSAKUSA-N
Popularity 120,599 references in papers

Physical and Chemical Properties

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Molecular Formula C21H30O2
Molecular Weight 314.50 g/mol
Exact Mass 314.224580195 g/mol
Topological Polar Surface Area (TPSA) 34.10 Ų
XlogP 3.90
Atomic LogP (AlogP) 4.72
H-Bond Acceptor 2
H-Bond Donor 0
Rotatable Bonds 1

Synonyms

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57-83-0
Pregn-4-ene-3,20-dione
Agolutin
Crinone
4-Pregnene-3,20-dione
Utrogestan
Prometrium
Syngesterone
Luteol
Cyclogest
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Progesterone

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 1.0000 100.00%
Caco-2 + 0.8534 85.34%
Blood Brain Barrier + 0.8500 85.00%
Human oral bioavailability - 0.8286 82.86%
Subcellular localzation Mitochondria 0.6698 66.98%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7650 76.50%
OATP1B3 inhibitior + 0.9819 98.19%
MATE1 inhibitior - 0.7800 78.00%
OCT2 inhibitior + 0.8000 80.00%
BSEP inhibitior + 0.9001 90.01%
P-glycoprotein inhibitior + 0.9518 95.18%
P-glycoprotein substrate - 0.9309 93.09%
CYP3A4 substrate + 0.7980 79.80%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8713 87.13%
CYP3A4 inhibition - 0.8309 83.09%
CYP2C9 inhibition - 0.9071 90.71%
CYP2C19 inhibition - 0.6514 65.14%
CYP2D6 inhibition - 0.9533 95.33%
CYP1A2 inhibition - 0.9045 90.45%
CYP2C8 inhibition - 0.9229 92.29%
CYP inhibitory promiscuity - 0.8203 82.03%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Warning 0.4528 45.28%
Eye corrosion - 0.9911 99.11%
Eye irritation - 0.9704 97.04%
Skin irritation + 0.6173 61.73%
Skin corrosion - 0.9668 96.68%
Ames mutagenesis - 0.9574 95.74%
Human Ether-a-go-go-Related Gene inhibition - 0.4103 41.03%
Micronuclear - 0.9200 92.00%
Hepatotoxicity + 0.9500 95.00%
skin sensitisation + 0.6755 67.55%
Respiratory toxicity + 0.9667 96.67%
Reproductive toxicity + 1.0000 100.00%
Mitochondrial toxicity + 0.9375 93.75%
Nephrotoxicity - 0.8418 84.18%
Acute Oral Toxicity (c) III 0.8127 81.27%
Estrogen receptor binding + 0.9117 91.17%
Androgen receptor binding + 0.8747 87.47%
Thyroid receptor binding + 0.8460 84.60%
Glucocorticoid receptor binding + 0.9162 91.62%
Aromatase binding + 0.7294 72.94%
PPAR gamma - 0.6860 68.60%
Honey bee toxicity - 0.8469 84.69%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity + 0.5200 52.00%
Fish aquatic toxicity + 0.9910 99.10%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL2782 P35610 Acyl coenzyme A:cholesterol acyltransferase 1 17000 nM
IC50
PMID: 3100794
CHEMBL3577 P00352 Aldehyde dehydrogenase 1A1 25118.9 nM
28183.8 nM
Potency
Potency
via CMAUP
via CMAUP
CHEMBL1871 P10275 Androgen Receptor 37 nM
8.5 nM
37 nM
37 nM
37 nM
37 nM
IC50
Ki
IC50
IC50
IC50
IC50
PMID: 9784110
via Super-PRED
PMID: 9464360
PMID: 8627601
PMID: 12781197
PMID: 12954062
CHEMBL2421 P08185 Corticosteroid binding globulin 41.69 nM
Ki
PMID: 15139751
CHEMBL3397 P11712 Cytochrome P450 2C9 5500 nM
Ki
PMID: 14761192
CHEMBL340 P08684 Cytochrome P450 3A4 3981.1 nM
3981.1 nM
3981.1 nM
3981.1 nM
Potency
Potency
Potency
Potency
via CMAUP
via CMAUP
via CMAUP
via CMAUP
CHEMBL4879 P12104 Fatty acid binding protein intestinal 20000 nM
Ki
PMID: 18533710
CHEMBL5409 Q8TDU6 G-protein coupled bile acid receptor 1 2770 nM
EC50
PMID: 18307294
CHEMBL2034 P04150 Glucocorticoid receptor 330 nM
30.5 nM
IC50
Ki
via CMAUP
via Super-PRED
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 12589.3 nM
12589.3 nM
Potency
Potency
via CMAUP
via CMAUP
CHEMBL1293226 B2RXH2 Lysine-specific demethylase 4D-like 39810.7 nM
Potency
via CMAUP
CHEMBL4040 P28482 MAP kinase ERK2 39810.7 nM
14125.4 nM
Potency
Potency
via CMAUP
via CMAUP
CHEMBL1293224 P10636 Microtubule-associated protein tau 39810.7 nM
Potency
via CMAUP
CHEMBL1994 P08235 Mineralocorticoid receptor 0.39 nM
14 nM
14 nM
14 nM
14 nM
Kd
IC50
IC50
IC50
IC50
via Super-PRED
PMID: 9784110
PMID: 12781197
PMID: 9464360
PMID: 12954062
CHEMBL5162 Q6W5P4 Neuropeptide S receptor 10000 nM
Potency
via CMAUP
CHEMBL4302 P08183 P-glycoprotein 1 48977.88 nM
192200 nM
88100 nM
96200 nM
47863.01 nM
47863.01 nM
IC50
IC50
IC50
IC50
IC50
IC50
PMID: 17890094
PMID: 11716514
PMID: 11716514
PMID: 11716514
PMID: 18678495
PMID: 17890094
CHEMBL1293235 P02545 Prelamin-A/C 35481.3 nM
35481.3 nM
10000 nM
6309.6 nM
Potency
Potency
Potency
Potency
via CMAUP
via CMAUP
via CMAUP
via CMAUP
CHEMBL208 P06401 Progesterone receptor 0.1 nM
5 nM
17 nM
3.5 nM
0.2 nM
EC50
IC50
IC50
IC50
IC50
via Super-PRED
PMID: 8523399
PMID: 8523400
PMID: 11859003
PMID: 24900290
CHEMBL287 Q99720 Sigma opioid receptor 3055 nM
IC50
via CMAUP
CHEMBL5685 O15245 Solute carrier family 22 member 1 3050 nM
IC50
PMID: 12110607
CHEMBL1743122 O15244 Solute carrier family 22 member 2 26700 nM
IC50
PMID: 12110607
CHEMBL2073673 O75751 Solute carrier family 22 member 3 4280 nM
IC50
PMID: 12110607
CHEMBL1293232 Q16637 Survival motor neuron protein 15848.9 nM
14125.4 nM
Potency
Potency
via CMAUP
via CMAUP
CHEMBL3305 P04278 Testis-specific androgen-binding protein 114.82 nM
Kd
via Super-PRED
CHEMBL1293256 P40225 Thrombopoietin 10000 nM
10000 nM
Potency
Potency
via CMAUP
via CMAUP
CHEMBL1963 P16473 Thyroid stimulating hormone receptor 10000 nM
25118.9 nM
25118.9 nM
10000 nM
Potency
Potency
Potency
Potency
via CMAUP
via CMAUP
via CMAUP
via CMAUP

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.70% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 93.80% 91.11%
CHEMBL4224 P49759 Dual specificty protein kinase CLK1 92.38% 85.30%
CHEMBL3746 P80365 11-beta-hydroxysteroid dehydrogenase 2 90.04% 94.78%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 88.45% 95.56%
CHEMBL340 P08684 Cytochrome P450 3A4 86.92% 91.19%
CHEMBL253 P34972 Cannabinoid CB2 receptor 85.63% 97.25%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 84.48% 94.45%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 82.78% 93.04%
CHEMBL1940 Q13936 Voltage-gated L-type calcium channel alpha-1C subunit 82.75% 86.00%
CHEMBL2581 P07339 Cathepsin D 81.86% 98.95%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.29% 89.00%

Cross-Links

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PubChem 5994
NPASS NPC307176
ChEMBL CHEMBL103
LOTUS LTS0238391
wikiData Q26963