Perforatin A

Details

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Internal ID f288d6c2-db3a-4003-9ff5-b49124f40548
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Pyranochromenes
IUPAC Name 5-methoxy-2,8,8-trimethylpyrano[2,3-h]chromen-4-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C16H16O4/c1-9-7-11(17)14-13(18-4)8-12-10(15(14)19-9)5-6-16(2,3)20-12/h5-8H,1-4H3
InChI Key KADZFFQFRJPWDH-UHFFFAOYSA-N
Popularity 11 references in papers

Physical and Chemical Properties

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Molecular Formula C16H16O4
Molecular Weight 272.29 g/mol
Exact Mass 272.10485899 g/mol
Topological Polar Surface Area (TPSA) 44.80 Ų
XlogP 2.80
Atomic LogP (AlogP) 3.29
H-Bond Acceptor 4
H-Bond Donor 0
Rotatable Bonds 1

Synonyms

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35930-31-5
5-O-Methylalloptaeroxylin
O-Methylalloptaeroxylin
CHEBI:2108
CHEMBL2164965
C09014
4H,8H-Benzo[1,2-b:3,4-b']dipyran-4-one, 5-methoxy-2,8,8-trimethyl-
AC1L9C0W
5-methoxy-2,8,8-trimethylpyrano[2,3-h]chromen-4-one
orb1991753
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Perforatin A

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9936 99.36%
Caco-2 + 0.7975 79.75%
Blood Brain Barrier + 0.5500 55.00%
Human oral bioavailability + 0.6286 62.86%
Subcellular localzation Mitochondria 0.7200 72.00%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9423 94.23%
OATP1B3 inhibitior + 0.9896 98.96%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior - 0.4857 48.57%
P-glycoprotein inhibitior - 0.5577 55.77%
P-glycoprotein substrate - 0.8010 80.10%
CYP3A4 substrate + 0.5720 57.20%
CYP2C9 substrate - 0.8221 82.21%
CYP2D6 substrate - 0.8299 82.99%
CYP3A4 inhibition + 0.7464 74.64%
CYP2C9 inhibition - 0.7633 76.33%
CYP2C19 inhibition + 0.8070 80.70%
CYP2D6 inhibition - 0.6432 64.32%
CYP1A2 inhibition + 0.8415 84.15%
CYP2C8 inhibition - 0.7024 70.24%
CYP inhibitory promiscuity + 0.7413 74.13%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.9413 94.13%
Carcinogenicity (trinary) Danger 0.4398 43.98%
Eye corrosion - 0.9707 97.07%
Eye irritation + 0.8972 89.72%
Skin irritation - 0.7975 79.75%
Skin corrosion - 0.9809 98.09%
Ames mutagenesis + 0.6300 63.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7175 71.75%
Micronuclear + 0.5500 55.00%
Hepatotoxicity - 0.5574 55.74%
skin sensitisation - 0.8133 81.33%
Respiratory toxicity - 0.6889 68.89%
Reproductive toxicity + 0.6333 63.33%
Mitochondrial toxicity - 0.6625 66.25%
Nephrotoxicity + 0.4928 49.28%
Acute Oral Toxicity (c) III 0.5075 50.75%
Estrogen receptor binding + 0.8990 89.90%
Androgen receptor binding + 0.7127 71.27%
Thyroid receptor binding + 0.6118 61.18%
Glucocorticoid receptor binding + 0.7900 79.00%
Aromatase binding + 0.8439 84.39%
PPAR gamma + 0.8109 81.09%
Honey bee toxicity - 0.7378 73.78%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.5300 53.00%
Fish aquatic toxicity + 0.9550 95.50%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.34% 91.11%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 93.73% 94.45%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 92.68% 94.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 90.81% 95.56%
CHEMBL2581 P07339 Cathepsin D 88.25% 98.95%
CHEMBL1293249 Q13887 Kruppel-like factor 5 88.12% 86.33%
CHEMBL4224 P49759 Dual specificty protein kinase CLK1 86.37% 85.30%
CHEMBL3401 O75469 Pregnane X receptor 85.96% 94.73%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 85.22% 96.77%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 84.89% 97.14%
CHEMBL1806 P11388 DNA topoisomerase II alpha 84.39% 89.00%
CHEMBL3192 Q9BY41 Histone deacetylase 8 84.38% 93.99%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 82.93% 85.14%
CHEMBL4208 P20618 Proteasome component C5 81.30% 90.00%
CHEMBL1255126 O15151 Protein Mdm4 80.56% 90.20%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Cedrelopsis gracilis
Cedrelopsis grevei
Harrisonia abyssinica
Harrisonia perforata
Hymenodictyon orixense

Cross-Links

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PubChem 441968
NPASS NPC46869
LOTUS LTS0139931
wikiData Q27105555