Pancratistatin

Details

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Internal ID 50f60a05-61f1-4f97-8885-d4a0a24df507
Taxonomy Alkaloids and derivatives > Amaryllidaceae alkaloids > Phenanthridine- and phenanthridone-type amaryllidaceae alkaloids
IUPAC Name (1R,2S,3S,4S,4aR,11bR)-1,2,3,4,7-pentahydroxy-2,3,4,4a,5,11b-hexahydro-1H-[1,3]dioxolo[4,5-j]phenanthridin-6-one
SMILES (Canonical) C1OC2=C(O1)C(=C3C(=C2)C4C(C(C(C(C4O)O)O)O)NC3=O)O
SMILES (Isomeric) C1OC2=C(O1)C(=C3C(=C2)[C@@H]4[C@H]([C@@H]([C@@H]([C@H]([C@@H]4O)O)O)O)NC3=O)O
InChI InChI=1S/C14H15NO8/c16-8-5-3-1-4-13(23-2-22-4)9(17)6(3)14(21)15-7(5)10(18)12(20)11(8)19/h1,5,7-8,10-12,16-20H,2H2,(H,15,21)/t5-,7-,8-,10+,11+,12+/m1/s1
InChI Key VREZDOWOLGNDPW-ALTGWBOUSA-N
Popularity 95 references in papers

Physical and Chemical Properties

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Molecular Formula C14H15NO8
Molecular Weight 325.27 g/mol
Exact Mass 325.07976644 g/mol
Topological Polar Surface Area (TPSA) 149.00 Ų
XlogP -1.60
Atomic LogP (AlogP) -2.23
H-Bond Acceptor 8
H-Bond Donor 6
Rotatable Bonds 0

Synonyms

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96203-70-2
(+)-Pancratistatin
Pancratistatine
4GUM4B7K5B
NSC-349156
UNII-4GUM4B7K5B
CHEBI:7906
(1R,2S,3S,4S,4aR,11bR)-1,2,3,4,7-pentahydroxy-2,3,4,4a,5,11b-hexahydro-1H-[1,3]dioxolo[4,5-j]phenanthridin-6-one
NSC349156
NSC 349156
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Pancratistatin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7171 71.71%
Caco-2 - 0.8858 88.58%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability + 0.6000 60.00%
Subcellular localzation Mitochondria 0.5398 53.98%
OATP2B1 inhibitior - 0.8596 85.96%
OATP1B1 inhibitior + 0.8925 89.25%
OATP1B3 inhibitior + 0.9465 94.65%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 1.0000 100.00%
BSEP inhibitior - 0.8581 85.81%
P-glycoprotein inhibitior - 0.9243 92.43%
P-glycoprotein substrate - 0.7995 79.95%
CYP3A4 substrate - 0.5110 51.10%
CYP2C9 substrate - 0.8064 80.64%
CYP2D6 substrate - 0.8646 86.46%
CYP3A4 inhibition - 0.6665 66.65%
CYP2C9 inhibition - 0.8916 89.16%
CYP2C19 inhibition - 0.8151 81.51%
CYP2D6 inhibition - 0.8094 80.94%
CYP1A2 inhibition + 0.5223 52.23%
CYP2C8 inhibition - 0.8494 84.94%
CYP inhibitory promiscuity - 0.7287 72.87%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6959 69.59%
Eye corrosion - 0.9920 99.20%
Eye irritation - 0.8441 84.41%
Skin irritation - 0.7840 78.40%
Skin corrosion - 0.9481 94.81%
Ames mutagenesis - 0.5800 58.00%
Human Ether-a-go-go-Related Gene inhibition - 0.7157 71.57%
Micronuclear + 0.8400 84.00%
Hepatotoxicity - 0.5822 58.22%
skin sensitisation - 0.7936 79.36%
Respiratory toxicity + 0.5444 54.44%
Reproductive toxicity + 0.7889 78.89%
Mitochondrial toxicity + 0.7625 76.25%
Nephrotoxicity - 0.5600 56.00%
Acute Oral Toxicity (c) III 0.5362 53.62%
Estrogen receptor binding - 0.5125 51.25%
Androgen receptor binding - 0.5206 52.06%
Thyroid receptor binding + 0.6163 61.63%
Glucocorticoid receptor binding + 0.6482 64.82%
Aromatase binding + 0.5416 54.16%
PPAR gamma + 0.5633 56.33%
Honey bee toxicity - 0.8420 84.20%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.6900 69.00%
Fish aquatic toxicity - 0.5707 57.07%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.48% 91.11%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 96.23% 94.45%
CHEMBL1806 P11388 DNA topoisomerase II alpha 93.10% 89.00%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 92.80% 96.77%
CHEMBL2581 P07339 Cathepsin D 89.44% 98.95%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 89.34% 90.71%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 87.92% 95.56%
CHEMBL1994 P08235 Mineralocorticoid receptor 87.40% 100.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 86.74% 97.09%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 84.65% 93.40%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.87% 95.89%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 83.86% 85.14%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 83.36% 99.23%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 83.16% 92.62%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 83.15% 96.09%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 80.08% 96.21%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Amaryllidaceae
Delphinium denudatum
Habranthus brachyandrus
Hedera helix
Hymenocallis littoralis
Hymenocallis speciosa
Panax ginseng
Pancratium maritimum
Scadoxus multiflorus subsp. multiflorus
Zephyranthes carinata

Cross-Links

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PubChem 441597
NPASS NPC115343
ChEMBL CHEMBL419335
LOTUS LTS0155988
wikiData Q7130395