Javanicoside C

Details

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Internal ID b58fb70b-4458-4695-afb7-e105ab9097cf
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene lactones > Quassinoids
IUPAC Name methyl (1R,2S,3R,6R,13S,14R,15R,16S,17S)-15,16-dihydroxy-9,13-dimethyl-3-(3-methylbut-2-enoyloxy)-4,10-dioxo-11-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-5,18-dioxapentacyclo[12.5.0.01,6.02,17.08,13]nonadeca-8,11-diene-17-carboxylate
SMILES (Canonical) CC1=C2CC3C45COC(C4C(C(=O)O3)OC(=O)C=C(C)C)(C(C(C5C2(C=C(C1=O)OC6C(C(C(C(O6)CO)O)O)O)C)O)O)C(=O)OC
SMILES (Isomeric) CC1=C2C[C@@H]3[C@@]45CO[C@@]([C@@H]4[C@H](C(=O)O3)OC(=O)C=C(C)C)([C@H]([C@@H]([C@@H]5[C@]2(C=C(C1=O)O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO)O)O)O)C)O)O)C(=O)OC
InChI InChI=1S/C32H40O16/c1-11(2)6-17(34)48-23-25-31-10-44-32(25,29(42)43-5)26(40)22(39)24(31)30(4)8-14(18(35)12(3)13(30)7-16(31)47-27(23)41)45-28-21(38)20(37)19(36)15(9-33)46-28/h6,8,15-16,19-26,28,33,36-40H,7,9-10H2,1-5H3/t15-,16-,19-,20+,21-,22-,23-,24-,25-,26+,28-,30+,31-,32+/m1/s1
InChI Key ITAQGRSJJGHHKP-ZAJWGGORSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C32H40O16
Molecular Weight 680.60 g/mol
Exact Mass 680.23163518 g/mol
Topological Polar Surface Area (TPSA) 245.00 Ų
XlogP -0.30
Atomic LogP (AlogP) -2.30
H-Bond Acceptor 16
H-Bond Donor 6
Rotatable Bonds 6

Synonyms

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CHEMBL446883

2D Structure

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2D Structure of Javanicoside C

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7742 77.42%
Caco-2 - 0.8675 86.75%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.7808 78.08%
OATP2B1 inhibitior - 0.8608 86.08%
OATP1B1 inhibitior + 0.8262 82.62%
OATP1B3 inhibitior + 0.9184 91.84%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior + 0.8239 82.39%
P-glycoprotein inhibitior + 0.7237 72.37%
P-glycoprotein substrate + 0.7569 75.69%
CYP3A4 substrate + 0.7075 70.75%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8894 88.94%
CYP3A4 inhibition - 0.8912 89.12%
CYP2C9 inhibition - 0.8381 83.81%
CYP2C19 inhibition - 0.8510 85.10%
CYP2D6 inhibition - 0.9288 92.88%
CYP1A2 inhibition - 0.8822 88.22%
CYP2C8 inhibition + 0.6212 62.12%
CYP inhibitory promiscuity - 0.8753 87.53%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.5454 54.54%
Eye corrosion - 0.9859 98.59%
Eye irritation - 0.9127 91.27%
Skin irritation - 0.6971 69.71%
Skin corrosion - 0.9319 93.19%
Ames mutagenesis - 0.6400 64.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7089 70.89%
Micronuclear - 0.7000 70.00%
Hepatotoxicity - 0.5698 56.98%
skin sensitisation - 0.8508 85.08%
Respiratory toxicity + 0.7222 72.22%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity + 0.7250 72.50%
Nephrotoxicity + 0.7398 73.98%
Acute Oral Toxicity (c) III 0.6297 62.97%
Estrogen receptor binding + 0.7954 79.54%
Androgen receptor binding + 0.7138 71.38%
Thyroid receptor binding - 0.5259 52.59%
Glucocorticoid receptor binding + 0.7081 70.81%
Aromatase binding + 0.6839 68.39%
PPAR gamma + 0.7344 73.44%
Honey bee toxicity - 0.6223 62.23%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.5600 56.00%
Fish aquatic toxicity + 0.9223 92.23%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.98% 91.11%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 97.77% 96.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.50% 96.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 96.43% 85.14%
CHEMBL2581 P07339 Cathepsin D 96.20% 98.95%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 94.34% 89.34%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 93.41% 95.56%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 92.28% 94.45%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 88.56% 91.24%
CHEMBL3401 O75469 Pregnane X receptor 88.37% 94.73%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 87.75% 94.33%
CHEMBL1806 P11388 DNA topoisomerase II alpha 86.69% 89.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 86.50% 100.00%
CHEMBL5028 O14672 ADAM10 84.83% 97.50%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.57% 86.33%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.66% 95.89%
CHEMBL3922 P50579 Methionine aminopeptidase 2 82.19% 97.28%
CHEMBL3137262 O60341 LSD1/CoREST complex 81.66% 97.09%
CHEMBL4005 P42336 PI3-kinase p110-alpha subunit 81.28% 97.47%
CHEMBL4072 P07858 Cathepsin B 80.75% 93.67%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 80.53% 96.90%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Asplenium normale
Brucea javanica
Carpobrotus edulis
Castanea crenata
Centrolobium tomentosum
Ceratophyllum submersum
Dracocephalum kotschyi
Lippia carviodora
Myrica nana
Psilostrophe cooperi
Sideritis tragoriganum
Solanum jamaicense
Trifolium alexandrinum

Cross-Links

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PubChem 11169890
NPASS NPC596
LOTUS LTS0136489
wikiData Q105119942