Gnetin D

Details

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Internal ID 2e764765-4131-4100-8370-a57a0ff951b8
Taxonomy Phenylpropanoids and polyketides > 2-arylbenzofuran flavonoids
IUPAC Name 4-[(2S,3S)-3-(3,5-dihydroxyphenyl)-6-hydroxy-4-[(E)-2-(4-hydroxyphenyl)ethenyl]-2,3-dihydro-1-benzofuran-2-yl]benzene-1,3-diol
SMILES (Canonical) C1=CC(=CC=C1C=CC2=C3C(C(OC3=CC(=C2)O)C4=C(C=C(C=C4)O)O)C5=CC(=CC(=C5)O)O)O
SMILES (Isomeric) C1=CC(=CC=C1/C=C/C2=C3[C@@H]([C@H](OC3=CC(=C2)O)C4=C(C=C(C=C4)O)O)C5=CC(=CC(=C5)O)O)O
InChI InChI=1S/C28H22O7/c29-18-5-2-15(3-6-18)1-4-16-9-22(33)14-25-26(16)27(17-10-20(31)12-21(32)11-17)28(35-25)23-8-7-19(30)13-24(23)34/h1-14,27-34H/b4-1+/t27-,28+/m0/s1
InChI Key KYXFGKLZVUDIIX-BQYFGGCBSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C28H22O7
Molecular Weight 470.50 g/mol
Exact Mass 470.13655304 g/mol
Topological Polar Surface Area (TPSA) 131.00 Ų
XlogP 5.00
Atomic LogP (AlogP) 5.36
H-Bond Acceptor 7
H-Bond Donor 6
Rotatable Bonds 4

Synonyms

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84870-53-1
FS-7741

2D Structure

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2D Structure of Gnetin D

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9898 98.98%
Caco-2 - 0.8171 81.71%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Mitochondria 0.4875 48.75%
OATP2B1 inhibitior + 0.5693 56.93%
OATP1B1 inhibitior + 0.8272 82.72%
OATP1B3 inhibitior - 0.2406 24.06%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior + 0.6732 67.32%
P-glycoprotein inhibitior - 0.4373 43.73%
P-glycoprotein substrate - 0.7702 77.02%
CYP3A4 substrate + 0.5643 56.43%
CYP2C9 substrate + 0.6202 62.02%
CYP2D6 substrate + 0.3681 36.81%
CYP3A4 inhibition + 0.5901 59.01%
CYP2C9 inhibition + 0.9088 90.88%
CYP2C19 inhibition + 0.8471 84.71%
CYP2D6 inhibition - 0.8727 87.27%
CYP1A2 inhibition + 0.9282 92.82%
CYP2C8 inhibition + 0.7716 77.16%
CYP inhibitory promiscuity + 0.9725 97.25%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9100 91.00%
Carcinogenicity (trinary) Danger 0.3539 35.39%
Eye corrosion - 0.9885 98.85%
Eye irritation + 0.6428 64.28%
Skin irritation + 0.5230 52.30%
Skin corrosion - 0.9281 92.81%
Ames mutagenesis + 0.5200 52.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7783 77.83%
Micronuclear + 0.8500 85.00%
Hepatotoxicity - 0.6190 61.90%
skin sensitisation - 0.6951 69.51%
Respiratory toxicity + 0.5778 57.78%
Reproductive toxicity - 0.5000 50.00%
Mitochondrial toxicity - 0.5250 52.50%
Nephrotoxicity - 0.6419 64.19%
Acute Oral Toxicity (c) III 0.4075 40.75%
Estrogen receptor binding + 0.6452 64.52%
Androgen receptor binding + 0.8175 81.75%
Thyroid receptor binding + 0.7226 72.26%
Glucocorticoid receptor binding + 0.7139 71.39%
Aromatase binding + 0.6074 60.74%
PPAR gamma + 0.8411 84.11%
Honey bee toxicity - 0.8435 84.35%
Biodegradation - 0.9250 92.50%
Crustacea aquatic toxicity + 0.5600 56.00%
Fish aquatic toxicity + 0.9844 98.44%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.90% 91.11%
CHEMBL3192 Q9BY41 Histone deacetylase 8 97.28% 93.99%
CHEMBL3194 P02766 Transthyretin 96.41% 90.71%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.15% 95.56%
CHEMBL1806 P11388 DNA topoisomerase II alpha 90.47% 89.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.41% 86.33%
CHEMBL2563 Q9UQL6 Histone deacetylase 5 86.72% 89.67%
CHEMBL242 Q92731 Estrogen receptor beta 86.51% 98.35%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 86.00% 96.09%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 85.91% 99.15%
CHEMBL3401 O75469 Pregnane X receptor 85.83% 94.73%
CHEMBL1951 P21397 Monoamine oxidase A 84.81% 91.49%
CHEMBL2581 P07339 Cathepsin D 83.63% 98.95%
CHEMBL1929 P47989 Xanthine dehydrogenase 83.17% 96.12%
CHEMBL2716 Q8WUI4 Histone deacetylase 7 82.37% 89.44%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 82.28% 91.71%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 82.07% 93.40%
CHEMBL3227 P41594 Metabotropic glutamate receptor 5 81.56% 96.42%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 80.48% 96.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Gnetum africanum
Gnetum gnemon
Gnetum gnemonoides
Gnetum latifolium
Salacia lehmbachii

Cross-Links

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PubChem 102004736
LOTUS LTS0091808
wikiData Q104666844