Glycyrdione A

Details

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Internal ID f6aedb66-c742-4cf3-8c53-537b59830979
Taxonomy Phenylpropanoids and polyketides > Linear 1,3-diarylpropanoids > Chalcones and dihydrochalcones > Retro-dihydrochalcones
IUPAC Name 1-[2,4-dihydroxy-5-(3-methylbut-2-enyl)phenyl]-3-[4-hydroxy-3-(3-methylbut-2-enyl)phenyl]propane-1,3-dione
SMILES (Canonical) CC(=CCC1=CC(=C(C=C1O)O)C(=O)CC(=O)C2=CC(=C(C=C2)O)CC=C(C)C)C
SMILES (Isomeric) CC(=CCC1=CC(=C(C=C1O)O)C(=O)CC(=O)C2=CC(=C(C=C2)O)CC=C(C)C)C
InChI InChI=1S/C25H28O5/c1-15(2)5-7-17-11-18(9-10-21(17)26)22(27)13-24(29)20-12-19(8-6-16(3)4)23(28)14-25(20)30/h5-6,9-12,14,26,28,30H,7-8,13H2,1-4H3
InChI Key VDOHBGQSFOWYTB-UHFFFAOYSA-N
Popularity 3 references in papers

Physical and Chemical Properties

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Molecular Formula C25H28O5
Molecular Weight 408.50 g/mol
Exact Mass 408.19367399 g/mol
Topological Polar Surface Area (TPSA) 94.80 Ų
XlogP 6.50
Atomic LogP (AlogP) 5.28
H-Bond Acceptor 5
H-Bond Donor 3
Rotatable Bonds 8

Synonyms

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Glyinflanin A
MJ378UN8U6
142542-83-4
1,3-Propanedione, 1-(2,4-dihydroxy-5-(3-methyl-2-buten-1-yl)phenyl)-3-(4-hydroxy-3-(3-methyl-2-buten-1-yl)phenyl)-
1-(2,4-Dihydroxy-5-(3-methyl-2-buten-1-yl)phenyl)-3-(4-hydroxy-3-(3-methyl-2-buten-1-yl)phenyl)-1,3-propanedione
RefChem:37240
UNII-MJ378UN8U6
CHEMBL2437373
SCHEMBL12866293
BDBM50441630

2D Structure

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2D Structure of Glycyrdione A

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9849 98.49%
Caco-2 - 0.5928 59.28%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability + 0.5429 54.29%
Subcellular localzation Mitochondria 0.7979 79.79%
OATP2B1 inhibitior + 0.5702 57.02%
OATP1B1 inhibitior + 0.9417 94.17%
OATP1B3 inhibitior + 0.9176 91.76%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior + 0.8917 89.17%
P-glycoprotein inhibitior - 0.4366 43.66%
P-glycoprotein substrate - 0.7499 74.99%
CYP3A4 substrate - 0.6193 61.93%
CYP2C9 substrate - 0.7962 79.62%
CYP2D6 substrate - 0.8260 82.60%
CYP3A4 inhibition + 0.5739 57.39%
CYP2C9 inhibition + 0.8360 83.60%
CYP2C19 inhibition + 0.8836 88.36%
CYP2D6 inhibition - 0.5433 54.33%
CYP1A2 inhibition + 0.8640 86.40%
CYP2C8 inhibition - 0.7302 73.02%
CYP inhibitory promiscuity + 0.8102 81.02%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.8173 81.73%
Carcinogenicity (trinary) Non-required 0.7499 74.99%
Eye corrosion - 0.9915 99.15%
Eye irritation - 0.5829 58.29%
Skin irritation - 0.7801 78.01%
Skin corrosion - 0.8929 89.29%
Ames mutagenesis - 0.6800 68.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7244 72.44%
Micronuclear - 0.5441 54.41%
Hepatotoxicity + 0.5420 54.20%
skin sensitisation + 0.4754 47.54%
Respiratory toxicity - 0.5222 52.22%
Reproductive toxicity + 0.7000 70.00%
Mitochondrial toxicity - 0.5000 50.00%
Nephrotoxicity + 0.4852 48.52%
Acute Oral Toxicity (c) III 0.5741 57.41%
Estrogen receptor binding + 0.9181 91.81%
Androgen receptor binding + 0.5408 54.08%
Thyroid receptor binding + 0.6316 63.16%
Glucocorticoid receptor binding + 0.8359 83.59%
Aromatase binding + 0.7569 75.69%
PPAR gamma + 0.8845 88.45%
Honey bee toxicity - 0.9402 94.02%
Biodegradation - 0.9000 90.00%
Crustacea aquatic toxicity - 0.7500 75.00%
Fish aquatic toxicity + 1.0000 100.00%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL335 P18031 Protein-tyrosine phosphatase 1B 32600 nM
IC50
PMID: 24047800

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.93% 91.11%
CHEMBL4208 P20618 Proteasome component C5 93.08% 90.00%
CHEMBL221 P23219 Cyclooxygenase-1 92.88% 90.17%
CHEMBL3401 O75469 Pregnane X receptor 91.35% 94.73%
CHEMBL3060 Q9Y345 Glycine transporter 2 89.02% 99.17%
CHEMBL2535 P11166 Glucose transporter 86.95% 98.75%
CHEMBL1293249 Q13887 Kruppel-like factor 5 85.13% 86.33%
CHEMBL2581 P07339 Cathepsin D 84.58% 98.95%
CHEMBL1907591 P30926 Neuronal acetylcholine receptor; alpha4/beta4 82.71% 100.00%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 82.38% 89.34%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 81.57% 96.09%
CHEMBL3492 P49721 Proteasome Macropain subunit 81.37% 90.24%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 81.08% 94.33%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 81.02% 96.95%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 80.28% 91.24%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Glycyrrhiza glabra
Glycyrrhiza inflata
Glycyrrhiza uralensis

Cross-Links

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PubChem 15742118
NPASS NPC221777
ChEMBL CHEMBL2437373
LOTUS LTS0137051
wikiData Q105284295