Geranylgeranic acid

Details

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Internal ID 3ad4e484-1022-4ced-9ad9-f07ca83d5512
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Diterpenoids > Acyclic diterpenoids
IUPAC Name (2E,6E,10E)-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraenoic acid
SMILES (Canonical) CC(=CCCC(=CCCC(=CCCC(=CC(=O)O)C)C)C)C
SMILES (Isomeric) CC(=CCC/C(=C/CC/C(=C/CC/C(=C/C(=O)O)/C)/C)/C)C
InChI InChI=1S/C20H32O2/c1-16(2)9-6-10-17(3)11-7-12-18(4)13-8-14-19(5)15-20(21)22/h9,11,13,15H,6-8,10,12,14H2,1-5H3,(H,21,22)/b17-11+,18-13+,19-15+
InChI Key SZNLKILVMCHHSD-OZFNKYQOSA-N
Popularity 60 references in papers

Physical and Chemical Properties

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Molecular Formula C20H32O2
Molecular Weight 304.50 g/mol
Exact Mass 304.240230259 g/mol
Topological Polar Surface Area (TPSA) 37.30 Ų
XlogP 6.80
Atomic LogP (AlogP) 6.22
H-Bond Acceptor 1
H-Bond Donor 1
Rotatable Bonds 10

Synonyms

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Geranylgeranoic acid
83807-40-3
(2E,6E,10E)-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraenoic acid
CHEBI:84971
(2E,6E,10E)-geranylgeranic acid
2,6,10,14-Hexadecatetraenoicacid, 3,7,11,15-tetramethyl-
3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraenoic acid
35750-48-2
Geranylgeranic?Acid
starbld0008406
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Geranylgeranic acid

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9881 98.81%
Caco-2 + 0.8480 84.80%
Blood Brain Barrier + 0.9250 92.50%
Human oral bioavailability - 0.6429 64.29%
Subcellular localzation Mitochondria 0.4776 47.76%
OATP2B1 inhibitior - 0.8552 85.52%
OATP1B1 inhibitior + 0.9260 92.60%
OATP1B3 inhibitior + 0.8196 81.96%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 0.7750 77.50%
BSEP inhibitior + 0.7964 79.64%
P-glycoprotein inhibitior - 0.7167 71.67%
P-glycoprotein substrate - 0.9709 97.09%
CYP3A4 substrate - 0.6289 62.89%
CYP2C9 substrate + 0.6145 61.45%
CYP2D6 substrate - 0.9169 91.69%
CYP3A4 inhibition - 0.9514 95.14%
CYP2C9 inhibition - 0.8413 84.13%
CYP2C19 inhibition - 0.9121 91.21%
CYP2D6 inhibition - 0.9505 95.05%
CYP1A2 inhibition - 0.7437 74.37%
CYP2C8 inhibition - 0.9770 97.70%
CYP inhibitory promiscuity - 0.8509 85.09%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.6215 62.15%
Carcinogenicity (trinary) Non-required 0.6783 67.83%
Eye corrosion + 0.6630 66.30%
Eye irritation + 0.6679 66.79%
Skin irritation + 0.7622 76.22%
Skin corrosion - 0.9788 97.88%
Ames mutagenesis - 0.8300 83.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6631 66.31%
Micronuclear - 1.0000 100.00%
Hepatotoxicity - 0.6125 61.25%
skin sensitisation + 0.8139 81.39%
Respiratory toxicity - 0.8556 85.56%
Reproductive toxicity - 0.7347 73.47%
Mitochondrial toxicity - 0.6375 63.75%
Nephrotoxicity + 0.6070 60.70%
Acute Oral Toxicity (c) III 0.7048 70.48%
Estrogen receptor binding - 0.6417 64.17%
Androgen receptor binding - 0.7284 72.84%
Thyroid receptor binding + 0.6911 69.11%
Glucocorticoid receptor binding - 0.5768 57.68%
Aromatase binding - 0.6051 60.51%
PPAR gamma + 0.8618 86.18%
Honey bee toxicity - 0.9204 92.04%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.6600 66.00%
Fish aquatic toxicity + 0.9892 98.92%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4769 O95749 Geranylgeranyl pyrophosphate synthetase 93.76% 92.08%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 86.29% 96.09%
CHEMBL3060 Q9Y345 Glycine transporter 2 85.91% 99.17%
CHEMBL2581 P07339 Cathepsin D 84.90% 98.95%
CHEMBL221 P23219 Cyclooxygenase-1 82.95% 90.17%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Glycyrrhiza glabra
Glycyrrhiza inflata
Glycyrrhiza uralensis
Schisandra chinensis

Cross-Links

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PubChem 5275521
NPASS NPC308331
ChEMBL CHEMBL171326
LOTUS LTS0142328
wikiData Q27158232