Gardoside methyl ester

Details

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Internal ID dd5eded1-a64b-46c8-9769-974514fd63bc
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > O-glycosyl compounds
IUPAC Name methyl (1S,4aS,6S,7aS)-6-hydroxy-7-methylidene-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4a,5,6,7a-tetrahydro-1H-cyclopenta[c]pyran-4-carboxylate
SMILES (Canonical) COC(=O)C1=COC(C2C1CC(C2=C)O)OC3C(C(C(C(O3)CO)O)O)O
SMILES (Isomeric) COC(=O)C1=CO[C@H]([C@H]2[C@@H]1C[C@@H](C2=C)O)O[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)O
InChI InChI=1S/C17H24O10/c1-6-9(19)3-7-8(15(23)24-2)5-25-16(11(6)7)27-17-14(22)13(21)12(20)10(4-18)26-17/h5,7,9-14,16-22H,1,3-4H2,2H3/t7-,9+,10-,11-,12-,13+,14-,16+,17+/m1/s1
InChI Key AFFNBNJOIDYUQN-QUQWIGIVSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C17H24O10
Molecular Weight 388.40 g/mol
Exact Mass 388.13694696 g/mol
Topological Polar Surface Area (TPSA) 155.00 Ų
XlogP -2.10
Atomic LogP (AlogP) -2.23
H-Bond Acceptor 10
H-Bond Donor 5
Rotatable Bonds 4

Synonyms

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AKOS040734064

2D Structure

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2D Structure of Gardoside methyl ester

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6138 61.38%
Caco-2 - 0.8546 85.46%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.8286 82.86%
Subcellular localzation Mitochondria 0.5822 58.22%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7543 75.43%
OATP1B3 inhibitior + 0.9615 96.15%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior - 0.9534 95.34%
P-glycoprotein inhibitior - 0.8710 87.10%
P-glycoprotein substrate - 0.7840 78.40%
CYP3A4 substrate + 0.6128 61.28%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8572 85.72%
CYP3A4 inhibition - 0.8594 85.94%
CYP2C9 inhibition - 0.9186 91.86%
CYP2C19 inhibition - 0.8600 86.00%
CYP2D6 inhibition - 0.8958 89.58%
CYP1A2 inhibition - 0.8939 89.39%
CYP2C8 inhibition - 0.6627 66.27%
CYP inhibitory promiscuity - 0.8362 83.62%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.7222 72.22%
Eye corrosion - 0.9861 98.61%
Eye irritation - 0.9382 93.82%
Skin irritation - 0.7649 76.49%
Skin corrosion - 0.9446 94.46%
Ames mutagenesis - 0.5500 55.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5529 55.29%
Micronuclear - 0.7041 70.41%
Hepatotoxicity - 0.7750 77.50%
skin sensitisation - 0.8581 85.81%
Respiratory toxicity + 0.5222 52.22%
Reproductive toxicity + 0.8222 82.22%
Mitochondrial toxicity + 0.5500 55.00%
Nephrotoxicity + 0.7358 73.58%
Acute Oral Toxicity (c) III 0.5057 50.57%
Estrogen receptor binding + 0.6254 62.54%
Androgen receptor binding + 0.5378 53.78%
Thyroid receptor binding + 0.5434 54.34%
Glucocorticoid receptor binding - 0.5751 57.51%
Aromatase binding + 0.5550 55.50%
PPAR gamma - 0.5000 50.00%
Honey bee toxicity - 0.8028 80.28%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.7100 71.00%
Fish aquatic toxicity - 0.4907 49.07%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.92% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.54% 96.09%
CHEMBL218 P21554 Cannabinoid CB1 receptor 91.25% 96.61%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.31% 97.09%
CHEMBL3060 Q9Y345 Glycine transporter 2 87.07% 99.17%
CHEMBL3401 O75469 Pregnane X receptor 85.55% 94.73%
CHEMBL4208 P20618 Proteasome component C5 83.81% 90.00%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 82.97% 96.00%
CHEMBL2581 P07339 Cathepsin D 81.62% 98.95%
CHEMBL340 P08684 Cytochrome P450 3A4 81.27% 91.19%

Plants that contains it

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Cross-Links

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PubChem 51692952
NPASS NPC276566
LOTUS LTS0041328
wikiData Q104376085