Cylindrin

Details

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Internal ID 6790d122-8485-490f-b9ab-266f64a94b34
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Triterpenoids
IUPAC Name (3S,3aS,5aS,5bS,7aR,9S,11aS,13aR,13bS)-9-methoxy-3a,5a,8,8,11a,13a-hexamethyl-3-propan-2-yl-1,2,3,4,5,5b,6,7,7a,9,10,11,13,13b-tetradecahydrocyclopenta[a]chrysene
SMILES (Canonical) CC(C)C1CCC2C1(CCC3(C2(CC=C4C3CCC5C4(CCC(C5(C)C)OC)C)C)C)C
SMILES (Isomeric) CC(C)[C@@H]1CC[C@H]2[C@]1(CC[C@@]3([C@@]2(CC=C4[C@H]3CC[C@@H]5[C@@]4(CC[C@@H](C5(C)C)OC)C)C)C)C
InChI InChI=1S/C31H52O/c1-20(2)21-10-13-25-29(21,6)18-19-30(7)23-11-12-24-27(3,4)26(32-9)15-16-28(24,5)22(23)14-17-31(25,30)8/h14,20-21,23-26H,10-13,15-19H2,1-9H3/t21-,23+,24-,25-,26-,28+,29-,30-,31+/m0/s1
InChI Key MRNPHCMRIQYRFU-UWAWSDATSA-N
Popularity 11 references in papers

Physical and Chemical Properties

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Molecular Formula C31H52O
Molecular Weight 440.70 g/mol
Exact Mass 440.401816278 g/mol
Topological Polar Surface Area (TPSA) 9.20 Ų
XlogP 9.50
Atomic LogP (AlogP) 8.68
H-Bond Acceptor 1
H-Bond Donor 0
Rotatable Bonds 2

Synonyms

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17904-55-1
(3S,3aS,5aS,5bS,7aR,9S,11aS,13aR,13bS)-9-methoxy-3a,5a,8,8,11a,13a-hexamethyl-3-propan-2-yl-1,2,3,4,5,5b,6,7,7a,9,10,11,13,13b-tetradecahydrocyclopenta[a]chrysene
SCHEMBL3679265
CHEBI:81166
DTXSID30939172
AKOS040745691
HY-121227
CS-0081264
C17534
Q-100936
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Cylindrin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9973 99.73%
Caco-2 + 0.5449 54.49%
Blood Brain Barrier + 0.6250 62.50%
Human oral bioavailability + 0.5857 58.57%
Subcellular localzation Mitochondria 0.5285 52.85%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8797 87.97%
OATP1B3 inhibitior + 0.9605 96.05%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior - 0.5567 55.67%
P-glycoprotein inhibitior - 0.5570 55.70%
P-glycoprotein substrate - 0.7175 71.75%
CYP3A4 substrate + 0.6244 62.44%
CYP2C9 substrate - 0.7657 76.57%
CYP2D6 substrate - 0.7129 71.29%
CYP3A4 inhibition - 0.8181 81.81%
CYP2C9 inhibition - 0.8238 82.38%
CYP2C19 inhibition - 0.5328 53.28%
CYP2D6 inhibition - 0.9437 94.37%
CYP1A2 inhibition - 0.8554 85.54%
CYP2C8 inhibition - 0.6214 62.14%
CYP inhibitory promiscuity - 0.6776 67.76%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.9120 91.20%
Carcinogenicity (trinary) Non-required 0.4950 49.50%
Eye corrosion - 0.9837 98.37%
Eye irritation - 0.9301 93.01%
Skin irritation + 0.5140 51.40%
Skin corrosion - 0.9750 97.50%
Ames mutagenesis - 0.7200 72.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6658 66.58%
Micronuclear - 0.8500 85.00%
Hepatotoxicity - 0.6084 60.84%
skin sensitisation + 0.5805 58.05%
Respiratory toxicity + 0.5778 57.78%
Reproductive toxicity + 0.8333 83.33%
Mitochondrial toxicity + 0.6000 60.00%
Nephrotoxicity - 0.8569 85.69%
Acute Oral Toxicity (c) III 0.7238 72.38%
Estrogen receptor binding + 0.8362 83.62%
Androgen receptor binding + 0.7364 73.64%
Thyroid receptor binding + 0.6746 67.46%
Glucocorticoid receptor binding + 0.7933 79.33%
Aromatase binding + 0.6499 64.99%
PPAR gamma + 0.6229 62.29%
Honey bee toxicity - 0.6811 68.11%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity + 0.6400 64.00%
Fish aquatic toxicity + 0.9863 98.63%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.71% 96.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 93.40% 97.25%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 91.38% 91.11%
CHEMBL2996 Q05655 Protein kinase C delta 91.35% 97.79%
CHEMBL5608 Q16288 NT-3 growth factor receptor 90.88% 95.89%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 90.61% 94.45%
CHEMBL3137262 O60341 LSD1/CoREST complex 89.21% 97.09%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 88.48% 97.14%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 87.48% 96.38%
CHEMBL5203 P33316 dUTP pyrophosphatase 86.51% 99.18%
CHEMBL221 P23219 Cyclooxygenase-1 86.41% 90.17%
CHEMBL2581 P07339 Cathepsin D 84.70% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 84.56% 95.56%
CHEMBL240 Q12809 HERG 83.77% 89.76%
CHEMBL1871 P10275 Androgen Receptor 83.42% 96.43%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 83.09% 82.69%
CHEMBL241 Q14432 Phosphodiesterase 3A 82.28% 92.94%
CHEMBL4225 P49760 Dual specificity protein kinase CLK2 81.68% 80.96%
CHEMBL1994 P08235 Mineralocorticoid receptor 80.78% 100.00%
CHEMBL3746 P80365 11-beta-hydroxysteroid dehydrogenase 2 80.55% 94.78%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Attalea cohune
Diospyros discolor
Diospyros nigra
Elaeis guineensis
Imperata cylindrica
Saccharum officinarum

Cross-Links

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PubChem 189045
NPASS NPC7370
LOTUS LTS0145269
wikiData Q27155121