cucurbitacin K 2-O-beta-D-glucopyranoside

Details

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Internal ID d2611a41-5009-4691-b1f2-341c442168cc
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins > Cucurbitacin glycosides
IUPAC Name (8S,9R,10R,13R,14S,16R,17R)-16-hydroxy-4,4,9,13,14-pentamethyl-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-17-[(2R,5S)-2,5,6-trihydroxy-6-methyl-3-oxoheptan-2-yl]-8,10,12,15,16,17-hexahydro-7H-cyclopenta[a]phenanthrene-3,11-dione
SMILES (Canonical) CC1(C2=CCC3C4(CC(C(C4(CC(=O)C3(C2C=C(C1=O)OC5C(C(C(C(O5)CO)O)O)O)C)C)C(C)(C(=O)CC(C(C)(C)O)O)O)O)C)C
SMILES (Isomeric) C[C@@]12C[C@H]([C@@H]([C@]1(CC(=O)[C@@]3([C@H]2CC=C4[C@H]3C=C(C(=O)C4(C)C)O[C@H]5[C@@H]([C@H]([C@@H]([C@H](O5)CO)O)O)O)C)C)[C@](C)(C(=O)C[C@@H](C(C)(C)O)O)O)O
InChI InChI=1S/C36H54O13/c1-31(2)16-9-10-21-33(5)13-18(38)28(36(8,47)23(40)12-22(39)32(3,4)46)34(33,6)14-24(41)35(21,7)17(16)11-19(29(31)45)48-30-27(44)26(43)25(42)20(15-37)49-30/h9,11,17-18,20-22,25-28,30,37-39,42-44,46-47H,10,12-15H2,1-8H3/t17-,18-,20-,21+,22+,25-,26+,27-,28+,30-,33+,34-,35+,36+/m1/s1
InChI Key XPEAYHKXEWXAKV-JYUIKDNMSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C36H54O13
Molecular Weight 694.80 g/mol
Exact Mass 694.35644177 g/mol
Topological Polar Surface Area (TPSA) 232.00 Ų
XlogP 0.00
Atomic LogP (AlogP) 0.07
H-Bond Acceptor 13
H-Bond Donor 8
Rotatable Bonds 8

Synonyms

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CHEBI:68912
CHEMBL1923785
(8S,9R,10R,13R,14S,16R,17R)-16-hydroxy-4,4,9,13,14-pentamethyl-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-17-[(2R,5S)-2,5,6-trihydroxy-6-methyl-3-oxoheptan-2-yl]-8,10,12,15,16,17-hexahydro-7H-cyclopenta[a]phenanthrene-3,11-dione
Q27137267
(4R,9beta,16alpha,24S)-16,20,24,25-tetrahydroxy-9,10,14-trimethyl-1,11,22-trioxo-4,9-cyclo-9,10-secocholesta-2,5-dien-2-yl beta-D-glucopyranoside

2D Structure

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2D Structure of cucurbitacin K 2-O-beta-D-glucopyranoside

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9049 90.49%
Caco-2 - 0.8567 85.67%
Blood Brain Barrier - 0.5000 50.00%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.8255 82.55%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8519 85.19%
OATP1B3 inhibitior + 0.8709 87.09%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior - 0.5214 52.14%
P-glycoprotein inhibitior + 0.7392 73.92%
P-glycoprotein substrate - 0.5287 52.87%
CYP3A4 substrate + 0.7050 70.50%
CYP2C9 substrate - 0.8060 80.60%
CYP2D6 substrate - 0.8875 88.75%
CYP3A4 inhibition - 0.7781 77.81%
CYP2C9 inhibition - 0.8433 84.33%
CYP2C19 inhibition - 0.9144 91.44%
CYP2D6 inhibition - 0.9454 94.54%
CYP1A2 inhibition - 0.8551 85.51%
CYP2C8 inhibition + 0.6038 60.38%
CYP inhibitory promiscuity - 0.9191 91.91%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6753 67.53%
Eye corrosion - 0.9901 99.01%
Eye irritation - 0.9129 91.29%
Skin irritation - 0.5459 54.59%
Skin corrosion - 0.9443 94.43%
Ames mutagenesis - 0.7200 72.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6752 67.52%
Micronuclear - 0.6700 67.00%
Hepatotoxicity - 0.6995 69.95%
skin sensitisation - 0.8945 89.45%
Respiratory toxicity + 0.7000 70.00%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity + 0.7250 72.50%
Nephrotoxicity + 0.4913 49.13%
Acute Oral Toxicity (c) III 0.6142 61.42%
Estrogen receptor binding + 0.7016 70.16%
Androgen receptor binding + 0.7418 74.18%
Thyroid receptor binding + 0.5176 51.76%
Glucocorticoid receptor binding + 0.7465 74.65%
Aromatase binding + 0.6869 68.69%
PPAR gamma + 0.6909 69.09%
Honey bee toxicity - 0.6794 67.94%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.6300 63.00%
Fish aquatic toxicity + 0.9826 98.26%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.11% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 98.34% 97.25%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 98.24% 85.14%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.19% 96.09%
CHEMBL2581 P07339 Cathepsin D 97.34% 98.95%
CHEMBL3137262 O60341 LSD1/CoREST complex 96.28% 97.09%
CHEMBL218 P21554 Cannabinoid CB1 receptor 96.20% 96.61%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 95.70% 94.45%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 91.06% 96.95%
CHEMBL1293294 P51151 Ras-related protein Rab-9A 89.18% 87.67%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 88.85% 95.56%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 88.81% 96.77%
CHEMBL3401 O75469 Pregnane X receptor 88.67% 94.73%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 85.57% 91.07%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 83.85% 89.34%
CHEMBL1806 P11388 DNA topoisomerase II alpha 82.75% 89.00%
CHEMBL3359 P21462 Formyl peptide receptor 1 81.24% 93.56%
CHEMBL2069156 Q14145 Kelch-like ECH-associated protein 1 81.21% 82.38%
CHEMBL4581 P52732 Kinesin-like protein 1 80.60% 93.18%
CHEMBL1994 P08235 Mineralocorticoid receptor 80.51% 100.00%
CHEMBL4208 P20618 Proteasome component C5 80.08% 90.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Bryonia cretica
Citrullus colocynthis
Trichosanthes tricuspidata

Cross-Links

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PubChem 6324997
LOTUS LTS0112868
wikiData Q27137267