Cadensin D

Details

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Internal ID f87878b9-7605-414f-859a-bfa05a025729
Taxonomy Organoheterocyclic compounds > Benzodioxanes > Phenylbenzodioxanes > Phenylbenzo-1,4-dioxanes
IUPAC Name (2R,3R)-3-(4-hydroxy-3,5-dimethoxyphenyl)-2-(hydroxymethyl)-5-methoxy-2,3-dihydro-[1,4]dioxino[2,3-c]xanthen-7-one
SMILES (Canonical) COC1=CC(=CC(=C1O)OC)C2C(OC3=C4C(=CC(=C3O2)OC)C(=O)C5=CC=CC=C5O4)CO
SMILES (Isomeric) COC1=CC(=CC(=C1O)OC)[C@@H]2[C@H](OC3=C4C(=CC(=C3O2)OC)C(=O)C5=CC=CC=C5O4)CO
InChI InChI=1S/C25H22O9/c1-29-16-8-12(9-17(30-2)21(16)28)22-19(11-26)33-25-23-14(10-18(31-3)24(25)34-22)20(27)13-6-4-5-7-15(13)32-23/h4-10,19,22,26,28H,11H2,1-3H3/t19-,22-/m1/s1
InChI Key MIKIHCHUGBZLHD-DENIHFKCSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C25H22O9
Molecular Weight 466.40 g/mol
Exact Mass 466.12638228 g/mol
Topological Polar Surface Area (TPSA) 113.00 Ų
XlogP 3.10
Atomic LogP (AlogP) 3.55
H-Bond Acceptor 9
H-Bond Donor 2
Rotatable Bonds 5

Synonyms

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102349-35-9
(2R,3R)-3-(4-hydroxy-3,5-dimethoxyphenyl)-2-(hydroxymethyl)-5-methoxy-2,3-dihydro-[1,4]dioxino[2,3-c]xanthen-7-one
Hypericorin
7H-1,4-Dioxino[2,3-c]xanthen-7-one, 2,3-dihydro-3-(4-hydroxy-3,5-dimethoxyphenyl)-2-(hydroxymethyl)-5-methoxy-, (2R,3R)-rel-
DTXSID50907398
AKOS040761442
F92755
3-(4-Hydroxy-3,5-dimethoxyphenyl)-2-(hydroxymethyl)-5-methoxy-2,3-dihydro-7H-[1,4]dioxino[2,3-c]xanthen-7-one

2D Structure

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2D Structure of Cadensin D

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9479 94.79%
Caco-2 - 0.6283 62.83%
Blood Brain Barrier - 0.8250 82.50%
Human oral bioavailability - 0.5143 51.43%
Subcellular localzation Mitochondria 0.8136 81.36%
OATP2B1 inhibitior - 0.8628 86.28%
OATP1B1 inhibitior + 0.7943 79.43%
OATP1B3 inhibitior - 0.3304 33.04%
MATE1 inhibitior - 0.7800 78.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior + 0.8951 89.51%
P-glycoprotein inhibitior + 0.9106 91.06%
P-glycoprotein substrate - 0.6294 62.94%
CYP3A4 substrate + 0.6215 62.15%
CYP2C9 substrate - 0.8253 82.53%
CYP2D6 substrate - 0.7787 77.87%
CYP3A4 inhibition - 0.7725 77.25%
CYP2C9 inhibition - 0.6496 64.96%
CYP2C19 inhibition - 0.6226 62.26%
CYP2D6 inhibition - 0.9165 91.65%
CYP1A2 inhibition - 0.7974 79.74%
CYP2C8 inhibition + 0.4894 48.94%
CYP inhibitory promiscuity + 0.6083 60.83%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.6968 69.68%
Eye corrosion - 0.9867 98.67%
Eye irritation - 0.8217 82.17%
Skin irritation - 0.8449 84.49%
Skin corrosion - 0.9760 97.60%
Ames mutagenesis - 0.5600 56.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4468 44.68%
Micronuclear + 0.6459 64.59%
Hepatotoxicity - 0.5323 53.23%
skin sensitisation - 0.9040 90.40%
Respiratory toxicity + 0.8222 82.22%
Reproductive toxicity + 0.7556 75.56%
Mitochondrial toxicity - 0.5000 50.00%
Nephrotoxicity - 0.6717 67.17%
Acute Oral Toxicity (c) III 0.6541 65.41%
Estrogen receptor binding + 0.8795 87.95%
Androgen receptor binding + 0.7940 79.40%
Thyroid receptor binding + 0.6577 65.77%
Glucocorticoid receptor binding + 0.8902 89.02%
Aromatase binding + 0.5348 53.48%
PPAR gamma + 0.7611 76.11%
Honey bee toxicity - 0.7502 75.02%
Biodegradation - 0.9250 92.50%
Crustacea aquatic toxicity - 0.5600 56.00%
Fish aquatic toxicity - 0.3974 39.74%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.75% 91.11%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 97.51% 85.14%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 95.78% 95.56%
CHEMBL1806 P11388 DNA topoisomerase II alpha 93.49% 89.00%
CHEMBL2581 P07339 Cathepsin D 93.36% 98.95%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 90.38% 94.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 89.59% 99.23%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 89.44% 92.62%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 88.63% 96.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.65% 86.33%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 84.45% 96.00%
CHEMBL3401 O75469 Pregnane X receptor 83.26% 94.73%
CHEMBL3060 Q9Y345 Glycine transporter 2 82.87% 99.17%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 80.77% 86.92%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Hypericum canariense
Hypericum geminiflorum
Hypericum subalatum
Psorospermum febrifugum

Cross-Links

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PubChem 190366
LOTUS LTS0049837
wikiData Q82876404