(1R,2R,3R,6R,8S,11S,12S,13S,14R,15R,16S,17R)-2,3,11,12,15,16-hexahydroxy-17-(hydroxymethyl)-9,13-dimethyl-5,18-dioxapentacyclo[12.5.0.01,6.02,17.08,13]nonadec-9-en-4-one

Details

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Internal ID 6356e19c-4aa9-4670-aba4-bae56b43792f
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene lactones > Quassinoids
IUPAC Name (1R,2R,3R,6R,8S,11S,12S,13S,14R,15R,16S,17R)-2,3,11,12,15,16-hexahydroxy-17-(hydroxymethyl)-9,13-dimethyl-5,18-dioxapentacyclo[12.5.0.01,6.02,17.08,13]nonadec-9-en-4-one
SMILES (Canonical) CC1=CC(C(C2(C1CC3C45C2C(C(C(C4(C(C(=O)O3)O)O)(OC5)CO)O)O)C)O)O
SMILES (Isomeric) CC1=C[C@@H]([C@H]([C@]2([C@H]1C[C@@H]3[C@]45[C@@H]2[C@H]([C@@H]([C@]([C@@]4([C@H](C(=O)O3)O)O)(OC5)CO)O)O)C)O)O
InChI InChI=1S/C20H28O10/c1-7-3-9(22)13(24)17(2)8(7)4-10-18-6-29-19(5-21,14(25)11(23)12(17)18)20(18,28)15(26)16(27)30-10/h3,8-15,21-26,28H,4-6H2,1-2H3/t8-,9-,10+,11+,12+,13+,14-,15-,17-,18+,19+,20-/m0/s1
InChI Key JYTPGFZCXMNCDX-KIMQNEDBSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C20H28O10
Molecular Weight 428.40 g/mol
Exact Mass 428.16824709 g/mol
Topological Polar Surface Area (TPSA) 177.00 Ų
XlogP -3.30
Atomic LogP (AlogP) -3.19
H-Bond Acceptor 10
H-Bond Donor 7
Rotatable Bonds 1

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (1R,2R,3R,6R,8S,11S,12S,13S,14R,15R,16S,17R)-2,3,11,12,15,16-hexahydroxy-17-(hydroxymethyl)-9,13-dimethyl-5,18-dioxapentacyclo[12.5.0.01,6.02,17.08,13]nonadec-9-en-4-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7411 74.11%
Caco-2 - 0.8149 81.49%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.5286 52.86%
Subcellular localzation Mitochondria 0.7539 75.39%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8458 84.58%
OATP1B3 inhibitior + 0.9573 95.73%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior - 0.6223 62.23%
P-glycoprotein inhibitior - 0.8126 81.26%
P-glycoprotein substrate + 0.5958 59.58%
CYP3A4 substrate + 0.6556 65.56%
CYP2C9 substrate - 0.8002 80.02%
CYP2D6 substrate - 0.8583 85.83%
CYP3A4 inhibition - 0.9623 96.23%
CYP2C9 inhibition - 0.9265 92.65%
CYP2C19 inhibition - 0.8906 89.06%
CYP2D6 inhibition - 0.9403 94.03%
CYP1A2 inhibition - 0.9019 90.19%
CYP2C8 inhibition - 0.7644 76.44%
CYP inhibitory promiscuity - 0.9207 92.07%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6445 64.45%
Eye corrosion - 0.9896 98.96%
Eye irritation - 0.9636 96.36%
Skin irritation - 0.6679 66.79%
Skin corrosion - 0.9390 93.90%
Ames mutagenesis - 0.7464 74.64%
Human Ether-a-go-go-Related Gene inhibition - 0.5070 50.70%
Micronuclear - 0.8400 84.00%
Hepatotoxicity + 0.5783 57.83%
skin sensitisation - 0.8679 86.79%
Respiratory toxicity + 0.5778 57.78%
Reproductive toxicity + 0.8333 83.33%
Mitochondrial toxicity + 0.6125 61.25%
Nephrotoxicity + 0.8354 83.54%
Acute Oral Toxicity (c) I 0.4951 49.51%
Estrogen receptor binding + 0.8147 81.47%
Androgen receptor binding + 0.7117 71.17%
Thyroid receptor binding + 0.6299 62.99%
Glucocorticoid receptor binding + 0.6677 66.77%
Aromatase binding + 0.6762 67.62%
PPAR gamma + 0.6058 60.58%
Honey bee toxicity - 0.7542 75.42%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.6500 65.00%
Fish aquatic toxicity + 0.9411 94.11%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.91% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 96.31% 97.25%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.81% 96.09%
CHEMBL2581 P07339 Cathepsin D 90.35% 98.95%
CHEMBL1994 P08235 Mineralocorticoid receptor 88.90% 100.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 88.54% 95.56%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 88.15% 94.45%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 87.92% 96.95%
CHEMBL3137262 O60341 LSD1/CoREST complex 87.71% 97.09%
CHEMBL3492 P49721 Proteasome Macropain subunit 86.59% 90.24%
CHEMBL1806 P11388 DNA topoisomerase II alpha 85.46% 89.00%
CHEMBL2996 Q05655 Protein kinase C delta 85.12% 97.79%
CHEMBL1293249 Q13887 Kruppel-like factor 5 82.89% 86.33%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Asplenium normale
Brucea javanica
Carpobrotus edulis
Castanea crenata
Centrolobium tomentosum
Ceratophyllum submersum
Dracocephalum kotschyi
Lippia carviodora
Myrica nana
Psilostrophe cooperi
Sideritis tragoriganum
Solanum jamaicense
Trifolium alexandrinum

Cross-Links

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PubChem 5315511
NPASS NPC113727
LOTUS LTS0187377
wikiData Q105137201