2-[2-[6-(15,19-Dihydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl)oxy-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl]oxy-5-hydroxy-6-(hydroxymethyl)-4-(3,4,5-trihydroxyoxan-2-yl)oxyoxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

Details

Top
Internal ID ced5dd66-e163-4605-9d88-c85f27847719
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name 2-[2-[6-(15,19-dihydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl)oxy-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl]oxy-5-hydroxy-6-(hydroxymethyl)-4-(3,4,5-trihydroxyoxan-2-yl)oxyoxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical) CC1CCC2(C(C3C(O2)CC4C3(CCC5C4CC(C6C5(CC(C(C6)OC7C(C(C(C(O7)CO)OC8C(C(C(C(O8)CO)O)OC9C(C(C(CO9)O)O)O)OC2C(C(C(C(O2)CO)O)O)O)O)O)O)C)O)C)C)OC1
SMILES (Isomeric) CC1CCC2(C(C3C(O2)CC4C3(CCC5C4CC(C6C5(CC(C(C6)OC7C(C(C(C(O7)CO)OC8C(C(C(C(O8)CO)O)OC9C(C(C(CO9)O)O)O)OC2C(C(C(C(O2)CO)O)O)O)O)O)O)C)O)C)C)OC1
InChI InChI=1S/C50H82O24/c1-18-5-8-50(66-16-18)19(2)32-28(74-50)10-22-20-9-24(54)23-11-27(25(55)12-49(23,4)21(20)6-7-48(22,32)3)67-45-40(64)37(61)41(31(15-53)70-45)71-47-43(73-46-39(63)36(60)34(58)29(13-51)68-46)42(35(59)30(14-52)69-47)72-44-38(62)33(57)26(56)17-65-44/h18-47,51-64H,5-17H2,1-4H3
InChI Key REIZDYUGEPBIJP-UHFFFAOYSA-N
Popularity 2 references in papers

Physical and Chemical Properties

Top
Molecular Formula C50H82O24
Molecular Weight 1067.20 g/mol
Exact Mass 1066.51960348 g/mol
Topological Polar Surface Area (TPSA) 376.00 Ų
XlogP -2.70
Atomic LogP (AlogP) -4.33
H-Bond Acceptor 24
H-Bond Donor 14
Rotatable Bonds 11

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of 2-[2-[6-(15,19-Dihydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl)oxy-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl]oxy-5-hydroxy-6-(hydroxymethyl)-4-(3,4,5-trihydroxyoxan-2-yl)oxyoxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5246 52.46%
Caco-2 - 0.8777 87.77%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.6174 61.74%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8930 89.30%
OATP1B3 inhibitior + 0.9480 94.80%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior + 0.6250 62.50%
BSEP inhibitior + 0.7534 75.34%
P-glycoprotein inhibitior + 0.7331 73.31%
P-glycoprotein substrate - 0.6322 63.22%
CYP3A4 substrate + 0.7516 75.16%
CYP2C9 substrate - 0.8054 80.54%
CYP2D6 substrate - 0.8164 81.64%
CYP3A4 inhibition - 0.9473 94.73%
CYP2C9 inhibition - 0.9215 92.15%
CYP2C19 inhibition - 0.8997 89.97%
CYP2D6 inhibition - 0.9561 95.61%
CYP1A2 inhibition - 0.9215 92.15%
CYP2C8 inhibition + 0.7102 71.02%
CYP inhibitory promiscuity - 0.9616 96.16%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6223 62.23%
Eye corrosion - 0.9917 99.17%
Eye irritation - 0.9055 90.55%
Skin irritation - 0.6555 65.55%
Skin corrosion - 0.9521 95.21%
Ames mutagenesis - 0.7300 73.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8287 82.87%
Micronuclear - 0.9100 91.00%
Hepatotoxicity - 0.9125 91.25%
skin sensitisation - 0.9420 94.20%
Respiratory toxicity + 0.6778 67.78%
Reproductive toxicity + 0.7000 70.00%
Mitochondrial toxicity - 0.5375 53.75%
Nephrotoxicity - 0.8685 86.85%
Acute Oral Toxicity (c) I 0.8185 81.85%
Estrogen receptor binding + 0.8496 84.96%
Androgen receptor binding + 0.7199 71.99%
Thyroid receptor binding - 0.5400 54.00%
Glucocorticoid receptor binding + 0.5602 56.02%
Aromatase binding + 0.6357 63.57%
PPAR gamma + 0.7510 75.10%
Honey bee toxicity - 0.5287 52.87%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity + 0.5200 52.00%
Fish aquatic toxicity + 0.7523 75.23%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL218 P21554 Cannabinoid CB1 receptor 98.13% 96.61%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.01% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.54% 91.11%
CHEMBL226 P30542 Adenosine A1 receptor 96.48% 95.93%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.22% 97.09%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 93.35% 95.50%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 92.64% 96.21%
CHEMBL1994 P08235 Mineralocorticoid receptor 91.51% 100.00%
CHEMBL253 P34972 Cannabinoid CB2 receptor 90.64% 97.25%
CHEMBL237 P41145 Kappa opioid receptor 90.54% 98.10%
CHEMBL4618 P09960 Leukotriene A4 hydrolase 89.75% 97.86%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 89.46% 96.77%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 88.26% 92.86%
CHEMBL5255 O00206 Toll-like receptor 4 88.23% 92.50%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 87.75% 95.58%
CHEMBL233 P35372 Mu opioid receptor 86.91% 97.93%
CHEMBL204 P00734 Thrombin 86.80% 96.01%
CHEMBL259 P32245 Melanocortin receptor 4 85.79% 95.38%
CHEMBL3922 P50579 Methionine aminopeptidase 2 85.52% 97.28%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 85.30% 94.45%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 85.02% 100.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.14% 95.89%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 83.65% 86.92%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 82.67% 91.24%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 82.44% 95.89%
CHEMBL2095194 P08709 Coagulation factor VII/tissue factor 82.36% 99.17%
CHEMBL206 P03372 Estrogen receptor alpha 81.83% 97.64%
CHEMBL5524 Q99873 Protein-arginine N-methyltransferase 1 81.64% 96.67%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 81.56% 97.29%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 81.08% 93.04%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 80.98% 95.83%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 80.40% 89.05%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.06% 89.00%
CHEMBL221 P23219 Cyclooxygenase-1 80.01% 90.17%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Allium aflatunense
Allium giganteum
Allium macleanii
Allium rotundum
Allium schubertii

Cross-Links

Top
PubChem 3306234
LOTUS LTS0206017
wikiData Q105234900