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Berberis stolonifera

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Table of Contents

Details
Description
Synonyms
Common Names
Subtypes (subspecies, varieties, subvarieties, forms)
Germination/Propagation
Distribution
Links to other databases
Genome
Scientific Literature
Phytochemical Profile
Biological Material
Contributors
Collections

Details Top

Internal ID UUID64400ce18213e652627273
Scientific name Berberis stolonifera
Authority Koehne & E.L.Wolf
First published in Repert. Spec. Nov. Regni Veg. 12: 129 (1913)

Description Top

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Synonyms Top

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Common names Top

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Subspecies (abbr. subsp./ssp.) Top

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Varieties (abbr. var.) Top

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Subvarieties (abbr. subvar.) Top

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Forms (abbr. f.) Top

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Germination/Propagation Top

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No germination or propagation data was added yet.

Distribution (via POWO/KEW) Top

Legend for the distribution data:
- Doubtful data
- Extinct
- Introduced
- Native

Links to other databases Top

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Database ID/link to page
World Flora Online wfo-0000563883
Tropicos 3500325
KEW urn:lsid:ipni.org:names:107113-1
The Plant List kew-2674476
Open Tree Of Life 275524
Observations.org 145973
NCBI Taxonomy 33814
IPNI 107113-1
GBIF 3981662
EOL 5515307
Elurikkus 445249

Genomes (via NCBI) Top

No reference genome is available on NCBI yet. We are constantly monitoring for new data.

Scientific Literature Top

Below are displayed the latest 15 articles published in PMC (PubMed Central®) and other sources (DOI number only)!
If you wish to see all the related articles click here.
Title Authors Publication Released IDs
Elucidation of the (R)-enantiospecific benzylisoquinoline alkaloid biosynthetic pathways in sacred lotus (Nelumbo nucifera) Menéndez-Perdomo IM, Facchini PJ Sci Rep 20-Feb-2023
PMCID:PMC9940101
doi:10.1038/s41598-023-29415-0
PMID:36805479
Full-length transcriptome and metabolite analysis reveal reticuline epimerase-independent pathways for benzylisoquinoline alkaloids biosynthesis in Sinomenium acutum Yang Y, Sun Y, Wang Z, Yin M, Sun R, Xue L, Huang X, Wang C, Yan X Front Plant Sci 20-Dec-2022
PMCID:PMC9808091
doi:10.3389/fpls.2022.1086335
PMID:36605968
Complete biosynthesis of the bisbenzylisoquinoline alkaloids guattegaumerine and berbamunine in yeast Payne JT, Valentic TR, Smolke CD Proc Natl Acad Sci U S A 20-Dec-2021
PMCID:PMC8713753
doi:10.1073/pnas.2112520118
PMID:34903659
Chloranthus genome provides insights into the early diversification of angiosperms Guo X, Fang D, Sahu SK, Yang S, Guang X, Folk R, Smith SA, Chanderbali AS, Chen S, Liu M, Yang T, Zhang S, Liu X, Xu X, Soltis PS, Soltis DE, Liu H Nat Commun 26-Nov-2021
PMCID:PMC8626473
doi:10.1038/s41467-021-26922-4
PMID:34836973
Cytochrome P450 Enzymes as Key Drivers of Alkaloid Chemical Diversification in Plants Nguyen TD, Dang TT Front Plant Sci 02-Jul-2021
PMCID:PMC8336426
doi:10.3389/fpls.2021.682181
PMID:34367208
Gene Expression and Isoform Identification of PacBio Full-Length cDNA Sequences for Berberine Biosynthesis in Berberis koreana Roy NS, Choi IY, Um T, Jeon MJ, Kim BY, Kim YD, Yu JK, Kim S, Kim NS Plants (Basel) 28-Jun-2021
PMCID:PMC8308982
doi:10.3390/plants10071314
PMID:34203474
Integration of full-length transcriptomics and targeted metabolomics to identify benzylisoquinoline alkaloid biosynthetic genes in Corydalis yanhusuo Xu D, Lin H, Tang Y, Huang L, Xu J, Nian S, Zhao Y Hortic Res 10-Jan-2021
PMCID:PMC7797006
doi:10.1038/s41438-020-00450-6
PMID:33423040
Benzylisoquinoline Alkaloids Biosynthesis in Sacred Lotus Menéndez-Perdomo IM, Facchini PJ Molecules 06-Nov-2018
PMCID:PMC6278464
doi:10.3390/molecules23112899
PMID:30404216
Investigation of benzylisoquinoline alkaloid biosynthetic pathway and its transcriptional regulation in lotus Deng X, Zhao L, Fang T, Xiong Y, Ogutu C, Yang D, Vimolmangkang S, Liu Y, Han Y Hortic Res 01-Jun-2018
PMCID:PMC5981371
doi:10.1038/s41438-018-0035-0
PMID:29872534
Identification and Characterization of Daurichromenic Acid Synthase Active in Anti-HIV Biosynthesis Iijima M, Munakata R, Takahashi H, Kenmoku H, Nakagawa R, Kodama T, Asakawa Y, Abe I, Yazaki K, Kurosaki F, Taura F Plant Physiol 05-Jul-2017
PMCID:PMC5543965
doi:10.1104/pp.17.00586
PMID:28679557
Isolation and Characterization of Reticuline N-Methyltransferase Involved in Biosynthesis of the Aporphine Alkaloid Magnoflorine in Opium Poppy Morris JS, Facchini PJ J Biol Chem 15-Sep-2016
PMCID:PMC5095398
doi:10.1074/jbc.M116.750893
PMID:27634038
Transcriptome analysis of 20 taxonomically related benzylisoquinoline alkaloid-producing plants Hagel JM, Morris JS, Lee EJ, Desgagné-Penix I, Bross CD, Chang L, Chen X, Farrow SC, Zhang Y, Soh J, Sensen CW, Facchini PJ BMC Plant Biol 18-Sep-2015
PMCID:PMC4575454
doi:10.1186/s12870-015-0596-0
PMID:26384972
Immature Seed Endosperm and Embryo Proteomics of the Lotus (Nelumbo Nucifera Gaertn.) by One-Dimensional Gel-Based Tandem Mass Spectrometry and a Comparison with the Mature Endosperm Proteome Moro CF, Fukao Y, Shibato J, Rakwal R, Agrawal GK, Shioda S, Kouzuma Y, Yonekura M Proteomes 14-Aug-2015
PMCID:PMC5217381
doi:10.3390/proteomes3030184
PMID:28248268
Synthesis of Morphinan Alkaloids in Saccharomyces cerevisiae Fossati E, Narcross L, Ekins A, Falgueyret JP, Martin VJ PLoS One 23-Apr-2015
PMCID:PMC4408053
doi:10.1371/journal.pone.0124459
PMID:25905794
Analysis of the Transcriptome of Erigeron breviscapus Uncovers Putative Scutellarin and Chlorogenic Acids Biosynthetic Genes and Genetic Markers Jiang NH, Zhang GH, Zhang JJ, Shu LP, Zhang W, Long GQ, Liu T, Meng ZG, Chen JW, Yang SC PLoS One 23-Jun-2014
PMCID:PMC4067309
doi:10.1371/journal.pone.0100357
PMID:24956277

Phytochemical Profile Top

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Below are displayed the proven (via scientific papers) natural compounds!
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Name PubChem ID Canonical SMILES MW Found in Proof
> Alkaloids and derivatives / Aporphines
1,10-Dimethoxy-6a-alpha-noraporphine-2,9-diol 628557 Click to see COC1=C(C=C2CC3C4=C(C2=C1)C(=C(C=C4CCN3)O)OC)O 313.30 unknown https://doi.org/10.1016/0031-9422(88)87027-4
Laurolitsine 22179 Click to see COC1=C(C=C2CC3C4=C(C2=C1)C(=C(C=C4CCN3)O)OC)O 313.30 unknown https://doi.org/10.1016/0031-9422(88)87027-4
> Alkaloids and derivatives / Protoberberine alkaloids and derivatives
Berberine 2353 Click to see COC1=C(C2=C[N+]3=C(C=C2C=C1)C4=CC5=C(C=C4CC3)OCO5)OC 336.40 unknown https://doi.org/10.1016/S0040-4039(00)87966-6
https://doi.org/10.1016/S0040-4039(00)61879-8
Columbamine 72310 Click to see COC1=C(C2=C[N+]3=C(C=C2C=C1)C4=CC(=C(C=C4CC3)OC)O)OC 338.40 unknown https://doi.org/10.1016/0031-9422(89)80187-6
https://doi.org/10.1016/0031-9422(93)85226-H
https://doi.org/10.1016/S0040-4039(00)95338-3
> Lignans, neolignans and related compounds
1-Isotetrandrine 457825 Click to see CN1CCC2=CC(=C3C=C2C1CC4=CC=C(C=C4)OC5=C(C=CC(=C5)CC6C7=C(O3)C(=C(C=C7CCN6C)OC)OC)OC)OC 622.70 unknown https://doi.org/10.1016/0031-9422(88)87027-4
6,6'-Dimethoxy-2,2'-dimethyloxyacanthan-7,12'-diol 122728 Click to see CN1CCC2=CC(=C(C3=C2C1CC4=CC=C(C=C4)OC5=C(C=CC(=C5)CC6C7=CC(=C(C=C7CCN6C)OC)O3)O)O)OC 594.70 unknown https://doi.org/10.1016/0031-9422(88)87027-4
6,6',7-Trimethoxy-2,2'-dimethylberbaman-12-ol 10170 Click to see CN1CCC2=CC(=C3C=C2C1CC4=CC=C(C=C4)OC5=C(C=CC(=C5)CC6C7=C(O3)C(=C(C=C7CCN6C)OC)OC)O)OC 608.70 unknown https://doi.org/10.1016/0031-9422(88)87027-4
Aromoline 362574 Click to see CN1CCC2=CC(=C(C3=C2C1CC4=CC=C(C=C4)OC5=C(C=CC(=C5)CC6C7=CC(=C(C=C7CCN6C)OC)O3)O)O)OC 594.70 unknown https://doi.org/10.1016/0031-9422(88)87027-4
Berbamine 275182 Click to see CN1CCC2=CC(=C3C=C2C1CC4=CC=C(C=C4)OC5=C(C=CC(=C5)CC6C7=C(O3)C(=C(C=C7CCN6C)OC)OC)O)OC 608.70 unknown https://doi.org/10.1016/0031-9422(88)87027-4
CID 12300053 12300053 Click to see CN1CCC2=CC(=C3C=C2C1CC4=CC=C(C=C4)OC5=C(C=CC(=C5)CC6C7=C(O3)C(=C(C=C7CCN6C)OC)OC)O)OC 608.70 unknown https://doi.org/10.1016/0031-9422(88)87027-4
Isotetrandrine 5422 Click to see CN1CCC2=CC(=C3C=C2C1CC4=CC=C(C=C4)OC5=C(C=CC(=C5)CC6C7=C(O3)C(=C(C=C7CCN6C)OC)OC)OC)OC 622.70 unknown https://doi.org/10.1016/0031-9422(88)87027-4
O-Methylberbamine 5351212 Click to see CN1CCC2=CC(=C3C=C2C1CC4=CC=C(C=C4)OC5=C(C=CC(=C5)CC6C7=C(O3)C(=C(C=C7CCN6C)OC)OC)OC)OC 622.70 unknown https://doi.org/10.1016/0031-9422(88)87027-4
> Organoheterocyclic compounds / Isoquinolines and derivatives / Benzylisoquinolines
(1S)-1-[[4-[2-hydroxy-5-[[(1R)-7-hydroxy-6-methoxy-1,2,3,4-tetrahydroisoquinolin-1-yl]methyl]phenoxy]phenyl]methyl]-6-methoxy-2-methyl-3,4-dihydro-1H-isoquinolin-7-ol 13895819 Click to see CN1CCC2=CC(=C(C=C2C1CC3=CC=C(C=C3)OC4=C(C=CC(=C4)CC5C6=CC(=C(C=C6CCN5)OC)O)O)O)OC 582.70 unknown https://doi.org/10.1016/S0031-9422(00)82337-7
https://doi.org/10.1016/0031-9422(88)87027-4
1-[[4-[2-hydroxy-5-[(7-hydroxy-6-methoxy-1,2,3,4-tetrahydroisoquinolin-1-yl)methyl]phenoxy]phenyl]methyl]-6-methoxy-2-methyl-3,4-dihydro-1H-isoquinolin-7-ol 13895818 Click to see CN1CCC2=CC(=C(C=C2C1CC3=CC=C(C=C3)OC4=C(C=CC(=C4)CC5C6=CC(=C(C=C6CCN5)OC)O)O)O)OC 582.70 unknown https://doi.org/10.1016/S0031-9422(00)82337-7
https://doi.org/10.1016/0031-9422(88)87027-4
Berbamunine 440585 Click to see CN1CCC2=CC(=C(C=C2C1CC3=CC=C(C=C3)OC4=C(C=CC(=C4)CC5C6=CC(=C(C=C6CCN5C)OC)O)O)O)OC 596.70 unknown https://doi.org/10.1016/S0040-4039(00)95338-3
https://doi.org/10.1039/C39890001725
https://doi.org/10.1016/0031-9422(88)87027-4
Magnoline 362563 Click to see CN1CCC2=CC(=C(C=C2C1CC3=CC=C(C=C3)OC4=C(C=CC(=C4)CC5C6=CC(=C(C=C6CCN5C)OC)O)O)O)OC 596.70 unknown https://doi.org/10.1016/0031-9422(88)87027-4
Reticulin 10233 Click to see CN1CCC2=CC(=C(C=C2C1CC3=CC(=C(C=C3)OC)O)O)OC 329.40 unknown https://doi.org/10.1016/0031-9422(90)85264-G
Reticuline 439653 Click to see CN1CCC2=CC(=C(C=C2C1CC3=CC(=C(C=C3)OC)O)O)OC 329.40 unknown https://doi.org/10.1016/0031-9422(90)85264-G
> Organoheterocyclic compounds / Isoquinolines and derivatives / Isoquinolones and derivatives
2,9,10-Trimethoxy-5,6-dihydroisoquinolino[2,1-b]isoquinolin-3-one 10065647 Click to see COC1=C(C2=CN3CCC4=CC(=O)C(=CC4=C3C=C2C=C1)OC)OC 337.40 unknown https://doi.org/10.1016/S0040-4039(00)87966-6
https://doi.org/10.1016/0031-9422(93)85226-H
https://doi.org/10.1016/S0040-4039(00)95338-3

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