trans-alpha-Bergaptene

Details

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Internal ID c6792fcc-45cf-4330-960b-72d11fcada21
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Monoterpenoids > Bicyclic monoterpenoids
IUPAC Name (1S,5S)-2,6-dimethyl-6-(4-methylpent-3-enyl)bicyclo[3.1.1]hept-2-ene
SMILES (Canonical) CC1=CCC2CC1C2(C)CCC=C(C)C
SMILES (Isomeric) CC1=CC[C@H]2C[C@@H]1C2(C)CCC=C(C)C
InChI InChI=1S/C15H24/c1-11(2)6-5-9-15(4)13-8-7-12(3)14(15)10-13/h6-7,13-14H,5,8-10H2,1-4H3/t13-,14-,15?/m0/s1
InChI Key YMBFCQPIMVLNIU-ZYOSVBKOSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C15H24
Molecular Weight 204.35 g/mol
Exact Mass 204.187800766 g/mol
Topological Polar Surface Area (TPSA) 0.00 Ų
XlogP 4.80
Atomic LogP (AlogP) 4.73
H-Bond Acceptor 0
H-Bond Donor 0
Rotatable Bonds 3

Synonyms

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trans-.alpha.-bergaptene
(Z)-.alpha.- bergamotene
YMBFCQPIMVLNIU-ZYOSVBKOSA-N

2D Structure

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2D Structure of trans-alpha-Bergaptene

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9903 99.03%
Caco-2 + 0.8698 86.98%
Blood Brain Barrier + 0.9500 95.00%
Human oral bioavailability + 0.5143 51.43%
Subcellular localzation Lysosomes 0.5492 54.92%
OATP2B1 inhibitior - 0.8496 84.96%
OATP1B1 inhibitior + 0.9158 91.58%
OATP1B3 inhibitior + 0.8742 87.42%
MATE1 inhibitior - 0.7600 76.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior - 0.8149 81.49%
P-glycoprotein inhibitior - 0.9662 96.62%
P-glycoprotein substrate - 0.7983 79.83%
CYP3A4 substrate + 0.5102 51.02%
CYP2C9 substrate - 0.7979 79.79%
CYP2D6 substrate - 0.7706 77.06%
CYP3A4 inhibition - 0.8900 89.00%
CYP2C9 inhibition - 0.7527 75.27%
CYP2C19 inhibition - 0.7010 70.10%
CYP2D6 inhibition - 0.9306 93.06%
CYP1A2 inhibition - 0.8396 83.96%
CYP2C8 inhibition - 0.8922 89.22%
CYP inhibitory promiscuity - 0.5943 59.43%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.7400 74.00%
Carcinogenicity (trinary) Non-required 0.4693 46.93%
Eye corrosion - 0.9071 90.71%
Eye irritation + 0.5499 54.99%
Skin irritation - 0.5346 53.46%
Skin corrosion - 0.9581 95.81%
Ames mutagenesis - 0.9100 91.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6528 65.28%
Micronuclear - 0.9700 97.00%
Hepatotoxicity + 0.5554 55.54%
skin sensitisation + 0.8419 84.19%
Respiratory toxicity - 0.5222 52.22%
Reproductive toxicity - 0.5444 54.44%
Mitochondrial toxicity - 0.5375 53.75%
Nephrotoxicity - 0.6484 64.84%
Acute Oral Toxicity (c) III 0.8534 85.34%
Estrogen receptor binding - 0.8565 85.65%
Androgen receptor binding - 0.7560 75.60%
Thyroid receptor binding - 0.6706 67.06%
Glucocorticoid receptor binding - 0.6947 69.47%
Aromatase binding - 0.8771 87.71%
PPAR gamma - 0.5486 54.86%
Honey bee toxicity - 0.8460 84.60%
Biodegradation - 0.5250 52.50%
Crustacea aquatic toxicity - 0.5000 50.00%
Fish aquatic toxicity + 1.0000 100.00%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 94.14% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 90.70% 96.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 86.85% 94.45%
CHEMBL3137262 O60341 LSD1/CoREST complex 86.23% 97.09%
CHEMBL221 P23219 Cyclooxygenase-1 84.91% 90.17%
CHEMBL1994 P08235 Mineralocorticoid receptor 84.05% 100.00%
CHEMBL253 P34972 Cannabinoid CB2 receptor 80.86% 97.25%
CHEMBL226 P30542 Adenosine A1 receptor 80.31% 95.93%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 80.27% 95.56%

Cross-Links

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PubChem 6428986
NPASS NPC195717