Scammonin viii

Details

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Internal ID 2ca93364-ab92-437c-b151-4fbef9c17947
Taxonomy Lipids and lipid-like molecules > Saccharolipids
IUPAC Name [30-[3,4-dihydroxy-6-(hydroxymethyl)-5-[(E)-2-methylbut-2-enoyl]oxyoxan-2-yl]oxy-4,5,11,12-tetrahydroxy-6-(hydroxymethyl)-13,31-dimethyl-27-oxo-17-pentyl-2,7,9,14,16,28,32-heptaoxatetracyclo[27.3.1.03,8.010,15]tritriacontan-33-yl] 2-methylbutanoate
SMILES (Canonical) CCCCCC1CCCCCCCCCC(=O)OC2C(C(OC(C2OC(=O)C(C)CC)OC3C(C(C(OC3OC4C(C(C(OC4O1)C)O)O)CO)O)O)C)OC5C(C(C(C(O5)CO)OC(=O)C(=CC)C)O)O
SMILES (Isomeric) CCCCCC1CCCCCCCCCC(=O)OC2C(C(OC(C2OC(=O)C(C)CC)OC3C(C(C(OC3OC4C(C(C(OC4O1)C)O)O)CO)O)O)C)OC5C(C(C(C(O5)CO)OC(=O)/C(=C/C)/C)O)O
InChI InChI=1S/C50H84O22/c1-8-11-17-20-29-21-18-15-13-12-14-16-19-22-32(53)67-43-39(70-47-38(59)37(58)40(31(24-52)66-47)68-45(60)25(4)9-2)28(7)63-50(44(43)69-46(61)26(5)10-3)72-42-36(57)34(55)30(23-51)65-49(42)71-41-35(56)33(54)27(6)62-48(41)64-29/h9,26-31,33-44,47-52,54-59H,8,10-24H2,1-7H3/b25-9+
InChI Key ATAAFPJNNNHRBG-YCPBAFNGSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C50H84O22
Molecular Weight 1037.20 g/mol
Exact Mass 1036.54542430 g/mol
Topological Polar Surface Area (TPSA) 315.00 Ų
XlogP 3.80

Synonyms

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145042-06-4
[30-[3,4-dihydroxy-6-(hydroxymethyl)-5-[(E)-2-methylbut-2-enoyl]oxyoxan-2-yl]oxy-4,5,11,12-tetrahydroxy-6-(hydroxymethyl)-13,31-dimethyl-27-oxo-17-pentyl-2,7,9,14,16,28,32-heptaoxatetracyclo[27.3.1.03,8.010,15]tritriacontan-33-yl] 2-methylbutanoate
(S)-11-((O-(E)-4-O-(2-Methyl-1-oxo-2-butenyl)-beta-D-glucopyranosyl-(1-4)-O-(S)-6-deoxy-2-O-(2-methyl-1-oxobutyl)-alpha-L-mannopyranosyl-(1-2)-O-beta-D-glucopyranosyl-(1-2)-6-deoxy-beta-D-glucopyranosyl)oxy)hexadecanoic acid intramol, 1,3'''-ester
Hexadecanoic acid, 11-((O-(E)-4-O-(2-methyl-1-oxo-2-butenyl)-beta-D-glucopyranosyl-(1-4)-O-(S)-6-deoxy-2-O-(2-methyl-1-oxobutyl)-alpha-L-mannopyranosyl-(1-2)-O-beta-D-glucopyranosyl-(1-2)-6-deoxy-beta-D-glucopyranosyl)oxy)-, intramol, 1,3'''-ester, (S)-

2D Structure

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2D Structure of Scammonin viii

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
No predicted properties yet!

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 98.99% 98.95%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.54% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.52% 96.09%
CHEMBL3359 P21462 Formyl peptide receptor 1 94.50% 93.56%
CHEMBL253 P34972 Cannabinoid CB2 receptor 94.24% 97.25%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 93.99% 100.00%
CHEMBL4072 P07858 Cathepsin B 92.98% 93.67%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 92.75% 96.47%
CHEMBL3060 Q9Y345 Glycine transporter 2 92.33% 99.17%
CHEMBL5255 O00206 Toll-like receptor 4 91.80% 92.50%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 91.49% 98.75%
CHEMBL1806 P11388 DNA topoisomerase II alpha 91.41% 89.00%
CHEMBL2996 Q05655 Protein kinase C delta 90.61% 97.79%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 90.61% 97.29%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 90.28% 94.33%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 90.10% 92.62%
CHEMBL3401 O75469 Pregnane X receptor 89.68% 94.73%
CHEMBL340 P08684 Cytochrome P450 3A4 88.63% 91.19%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 87.77% 94.45%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 87.37% 96.38%
CHEMBL2514 O95665 Neurotensin receptor 2 87.22% 100.00%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 87.21% 93.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.18% 95.89%
CHEMBL2345 P51812 Ribosomal protein S6 kinase alpha 3 86.55% 95.64%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 85.90% 95.50%
CHEMBL218 P21554 Cannabinoid CB1 receptor 85.85% 96.61%
CHEMBL3475 P05121 Plasminogen activator inhibitor-1 84.67% 83.00%
CHEMBL3004 P33527 Multidrug resistance-associated protein 1 84.37% 96.37%
CHEMBL4227 P25090 Lipoxin A4 receptor 84.27% 100.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 84.10% 95.56%
CHEMBL4005 P42336 PI3-kinase p110-alpha subunit 84.00% 97.47%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 83.83% 96.90%
CHEMBL3137262 O60341 LSD1/CoREST complex 83.54% 97.09%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 82.13% 92.88%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 81.93% 96.00%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 81.85% 90.71%
CHEMBL1293316 Q9HBX9 Relaxin receptor 1 81.22% 82.50%
CHEMBL2072 P35499 Sodium channel protein type IV alpha subunit 81.12% 92.32%
CHEMBL1293249 Q13887 Kruppel-like factor 5 80.95% 86.33%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 80.85% 89.34%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 80.67% 99.23%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Convolvulus scammonia
Ipomoea orizabensis

Cross-Links

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PubChem 6450151
LOTUS LTS0206618
wikiData Q104918234