rabdokunmin D

Details

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Internal ID 76f29b11-24d0-4c9a-bf13-b66a4be103c3
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Diterpenoids > Kaurane diterpenoids
IUPAC Name (1R,2R,4S,5S,9R,10S,11S,13S,16R)-2,11,16-trihydroxy-5-(hydroxymethyl)-5,9-dimethyl-14-methylidenetetracyclo[11.2.1.01,10.04,9]hexadecan-15-one
SMILES (Canonical) CC1(CCCC2(C1CC(C34C2C(CC(C3O)C(=C)C4=O)O)O)C)CO
SMILES (Isomeric) C[C@@]1(CCC[C@@]2([C@@H]1C[C@H]([C@]34[C@H]2[C@H](C[C@H]([C@H]3O)C(=C)C4=O)O)O)C)CO
InChI InChI=1S/C20H30O5/c1-10-11-7-12(22)15-19(3)6-4-5-18(2,9-21)13(19)8-14(23)20(15,16(10)24)17(11)25/h11-15,17,21-23,25H,1,4-9H2,2-3H3/t11-,12-,13+,14+,15-,17+,18+,19+,20+/m0/s1
InChI Key UOGAFMSJRSBOIJ-YHWIGYDFSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C20H30O5
Molecular Weight 350.40 g/mol
Exact Mass 350.20932405 g/mol
Topological Polar Surface Area (TPSA) 98.00 Ų
XlogP 1.00
Atomic LogP (AlogP) 1.04
H-Bond Acceptor 5
H-Bond Donor 4
Rotatable Bonds 1

Synonyms

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CHEMBL562046

2D Structure

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2D Structure of rabdokunmin D

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9847 98.47%
Caco-2 - 0.5836 58.36%
Blood Brain Barrier + 0.6738 67.38%
Human oral bioavailability - 0.5286 52.86%
Subcellular localzation Mitochondria 0.5657 56.57%
OATP2B1 inhibitior - 0.8619 86.19%
OATP1B1 inhibitior + 0.7783 77.83%
OATP1B3 inhibitior + 0.9400 94.00%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior + 0.5308 53.08%
BSEP inhibitior - 0.7827 78.27%
P-glycoprotein inhibitior - 0.8565 85.65%
P-glycoprotein substrate - 0.8056 80.56%
CYP3A4 substrate + 0.6308 63.08%
CYP2C9 substrate - 0.8155 81.55%
CYP2D6 substrate - 0.8081 80.81%
CYP3A4 inhibition - 0.8801 88.01%
CYP2C9 inhibition - 0.8028 80.28%
CYP2C19 inhibition - 0.8769 87.69%
CYP2D6 inhibition - 0.9284 92.84%
CYP1A2 inhibition - 0.8833 88.33%
CYP2C8 inhibition - 0.7482 74.82%
CYP inhibitory promiscuity - 0.8594 85.94%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.7035 70.35%
Eye corrosion - 0.9925 99.25%
Eye irritation - 0.9475 94.75%
Skin irritation - 0.5366 53.66%
Skin corrosion - 0.9497 94.97%
Ames mutagenesis - 0.6900 69.00%
Human Ether-a-go-go-Related Gene inhibition - 0.6435 64.35%
Micronuclear - 0.9500 95.00%
Hepatotoxicity - 0.5643 56.43%
skin sensitisation - 0.8668 86.68%
Respiratory toxicity + 0.6667 66.67%
Reproductive toxicity + 0.9556 95.56%
Mitochondrial toxicity + 0.9500 95.00%
Nephrotoxicity + 0.4650 46.50%
Acute Oral Toxicity (c) III 0.5655 56.55%
Estrogen receptor binding + 0.8154 81.54%
Androgen receptor binding + 0.6246 62.46%
Thyroid receptor binding + 0.6144 61.44%
Glucocorticoid receptor binding + 0.7061 70.61%
Aromatase binding + 0.7261 72.61%
PPAR gamma - 0.5561 55.61%
Honey bee toxicity - 0.7787 77.87%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.6700 67.00%
Fish aquatic toxicity + 0.9891 98.91%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL253 P34972 Cannabinoid CB2 receptor 96.53% 97.25%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.93% 91.11%
CHEMBL2581 P07339 Cathepsin D 93.65% 98.95%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.76% 97.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 87.68% 95.56%
CHEMBL299 P17252 Protein kinase C alpha 85.52% 98.03%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 85.36% 85.14%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 84.64% 82.69%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 84.08% 96.09%
CHEMBL218 P21554 Cannabinoid CB1 receptor 83.99% 96.61%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 83.21% 95.50%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 82.59% 94.45%
CHEMBL1937 Q92769 Histone deacetylase 2 82.40% 94.75%
CHEMBL5103 Q969S8 Histone deacetylase 10 82.16% 90.08%
CHEMBL1902 P62942 FK506-binding protein 1A 81.12% 97.05%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 80.93% 93.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 80.37% 95.89%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Isodon interruptus
Isodon loxothyrsus
Isodon phyllostachys
Isodon scoparius
Isodon wikstroemioides

Cross-Links

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PubChem 45267139
NPASS NPC231060
LOTUS LTS0184061
wikiData Q104400293