Pseudocolumbamine

Details

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Internal ID f2a6bc05-c34a-478b-9f3a-d77ecc32e66e
Taxonomy Alkaloids and derivatives > Protoberberine alkaloids and derivatives
IUPAC Name 3,10,11-trimethoxy-5,6-dihydroisoquinolino[2,1-b]isoquinolin-7-ium-2-ol
SMILES (Canonical) COC1=C(C=C2C(=C1)CC[N+]3=CC4=CC(=C(C=C4C=C23)OC)OC)O
SMILES (Isomeric) COC1=C(C=C2C(=C1)CC[N+]3=CC4=CC(=C(C=C4C=C23)OC)OC)O
InChI InChI=1S/C20H19NO4/c1-23-18-7-12-4-5-21-11-14-9-20(25-3)19(24-2)8-13(14)6-16(21)15(12)10-17(18)22/h6-11H,4-5H2,1-3H3/p+1
InChI Key VYHHIAOOSMWHKX-UHFFFAOYSA-O
Popularity 5 references in papers

Physical and Chemical Properties

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Molecular Formula C20H20NO4+
Molecular Weight 338.40 g/mol
Exact Mass 338.13923312 g/mol
Topological Polar Surface Area (TPSA) 51.80 Ų
XlogP 3.40
Atomic LogP (AlogP) 3.08
H-Bond Acceptor 4
H-Bond Donor 1
Rotatable Bonds 3

Synonyms

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64191-04-4
CHEBI:70644
3,10,11-trimethoxy-5,6-dihydroisoquinolino[2,1-b]isoquinolin-7-ium-2-ol
CHEMBL1270646
CHEMBL1197451
DTXSID30214395
BDBM50328690
AKOS040763159
Q27138977
Dibenzo(a,g)quinolizinium, 5,6-dihydro-2-hydroxy-3,10,11-trimethoxy-

2D Structure

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2D Structure of Pseudocolumbamine

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6295 62.95%
Caco-2 + 0.9307 93.07%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability + 0.6857 68.57%
Subcellular localzation Mitochondria 0.4493 44.93%
OATP2B1 inhibitior - 0.8732 87.32%
OATP1B1 inhibitior + 0.9032 90.32%
OATP1B3 inhibitior + 0.9510 95.10%
MATE1 inhibitior - 0.7800 78.00%
OCT2 inhibitior + 0.5500 55.00%
BSEP inhibitior + 0.7221 72.21%
P-glycoprotein inhibitior + 0.5734 57.34%
P-glycoprotein substrate - 0.7581 75.81%
CYP3A4 substrate + 0.5189 51.89%
CYP2C9 substrate - 0.8169 81.69%
CYP2D6 substrate + 0.3688 36.88%
CYP3A4 inhibition - 0.8617 86.17%
CYP2C9 inhibition - 0.9019 90.19%
CYP2C19 inhibition - 0.9044 90.44%
CYP2D6 inhibition + 0.7223 72.23%
CYP1A2 inhibition - 0.6441 64.41%
CYP2C8 inhibition - 0.7218 72.18%
CYP inhibitory promiscuity - 0.7392 73.92%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9400 94.00%
Carcinogenicity (trinary) Non-required 0.6224 62.24%
Eye corrosion - 0.9883 98.83%
Eye irritation - 0.8892 88.92%
Skin irritation - 0.7447 74.47%
Skin corrosion - 0.9450 94.50%
Ames mutagenesis - 0.6600 66.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5492 54.92%
Micronuclear + 0.5800 58.00%
Hepatotoxicity + 0.5375 53.75%
skin sensitisation - 0.9137 91.37%
Respiratory toxicity - 0.5444 54.44%
Reproductive toxicity + 0.7778 77.78%
Mitochondrial toxicity + 0.7000 70.00%
Nephrotoxicity - 0.6505 65.05%
Acute Oral Toxicity (c) III 0.6962 69.62%
Estrogen receptor binding + 0.9145 91.45%
Androgen receptor binding + 0.5669 56.69%
Thyroid receptor binding + 0.7360 73.60%
Glucocorticoid receptor binding + 0.8479 84.79%
Aromatase binding + 0.5336 53.36%
PPAR gamma + 0.7092 70.92%
Honey bee toxicity - 0.8826 88.26%
Biodegradation - 0.9750 97.50%
Crustacea aquatic toxicity + 0.5800 58.00%
Fish aquatic toxicity - 0.7637 76.37%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 93.72% 91.11%
CHEMBL241 Q14432 Phosphodiesterase 3A 92.06% 92.94%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 90.88% 96.09%
CHEMBL2581 P07339 Cathepsin D 90.45% 98.95%
CHEMBL2041 P07949 Tyrosine-protein kinase receptor RET 88.31% 91.79%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 87.22% 95.56%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.10% 86.33%
CHEMBL3192 Q9BY41 Histone deacetylase 8 86.51% 93.99%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 85.77% 94.00%
CHEMBL5747 Q92793 CREB-binding protein 84.70% 95.12%
CHEMBL4208 P20618 Proteasome component C5 84.53% 90.00%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 84.22% 85.14%
CHEMBL2056 P21728 Dopamine D1 receptor 83.77% 91.00%
CHEMBL2535 P11166 Glucose transporter 82.74% 98.75%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 81.37% 89.62%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Annickia chlorantha
Annona glabra
Chasmanthera dependens
Fibraurea tinctoria
Isopyrum thalictroides
Miliusa cuneata
Phoenicanthus obliquus

Cross-Links

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PubChem 182406
NPASS NPC251382
LOTUS LTS0056484
wikiData Q27138977