Phosphatidyl glycerol

Details

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Internal ID a9ad6a05-2f10-4bc6-9a23-f5ab0991d3b1
Taxonomy Lipids and lipid-like molecules > Glycerophospholipids > Glycerophosphoglycerols > Phosphatidylglycerols
IUPAC Name [1-[2,3-dihydroxypropoxy(hydroxy)phosphoryl]oxy-3-hexadecanoyloxypropan-2-yl] (9E,12E)-octadeca-9,12-dienoate
SMILES (Canonical) CCCCCCCCCCCCCCCC(=O)OCC(COP(=O)(O)OCC(CO)O)OC(=O)CCCCCCCC=CCC=CCCCCC
SMILES (Isomeric) CCCCCCCCCCCCCCCC(=O)OCC(COP(=O)(O)OCC(CO)O)OC(=O)CCCCCCC/C=C/C/C=C/CCCCC
InChI InChI=1S/C40H75O10P/c1-3-5-7-9-11-13-15-17-18-20-22-24-26-28-30-32-40(44)50-38(36-49-51(45,46)48-34-37(42)33-41)35-47-39(43)31-29-27-25-23-21-19-16-14-12-10-8-6-4-2/h11,13,17-18,37-38,41-42H,3-10,12,14-16,19-36H2,1-2H3,(H,45,46)/b13-11+,18-17+
InChI Key ATBOMIWRCZXYSZ-XZBBILGWSA-N
Popularity 4,055 references in papers

Physical and Chemical Properties

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Molecular Formula C40H75O10P
Molecular Weight 747.00 g/mol
Exact Mass 746.50978558 g/mol
Topological Polar Surface Area (TPSA) 149.00 Ų
XlogP 11.60
Atomic LogP (AlogP) 10.22
H-Bond Acceptor 9
H-Bond Donor 3
Rotatable Bonds 38

Synonyms

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CHEMBL507352
ATBOMIWRCZXYSZ-XZBBILGWSA-N
BDBM50292393

2D Structure

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2D Structure of Phosphatidyl glycerol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6740 67.40%
Caco-2 - 0.8395 83.95%
Blood Brain Barrier + 0.6750 67.50%
Human oral bioavailability - 0.7571 75.71%
Subcellular localzation Mitochondria 0.7756 77.56%
OATP2B1 inhibitior - 0.5727 57.27%
OATP1B1 inhibitior + 0.7413 74.13%
OATP1B3 inhibitior + 0.9371 93.71%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior + 0.8834 88.34%
P-glycoprotein inhibitior + 0.7033 70.33%
P-glycoprotein substrate - 0.6451 64.51%
CYP3A4 substrate + 0.6062 60.62%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8624 86.24%
CYP3A4 inhibition - 0.6986 69.86%
CYP2C9 inhibition - 0.8471 84.71%
CYP2C19 inhibition - 0.8047 80.47%
CYP2D6 inhibition - 0.8931 89.31%
CYP1A2 inhibition - 0.8116 81.16%
CYP2C8 inhibition - 0.6575 65.75%
CYP inhibitory promiscuity - 0.9696 96.96%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.6500 65.00%
Carcinogenicity (trinary) Non-required 0.6596 65.96%
Eye corrosion - 0.7748 77.48%
Eye irritation - 0.8884 88.84%
Skin irritation - 0.7600 76.00%
Skin corrosion - 0.6601 66.01%
Ames mutagenesis - 0.5500 55.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4138 41.38%
Micronuclear - 0.7900 79.00%
Hepatotoxicity + 0.6125 61.25%
skin sensitisation - 0.8176 81.76%
Respiratory toxicity + 0.5333 53.33%
Reproductive toxicity - 0.8778 87.78%
Mitochondrial toxicity + 0.5125 51.25%
Nephrotoxicity - 0.6353 63.53%
Acute Oral Toxicity (c) III 0.5593 55.93%
Estrogen receptor binding + 0.8126 81.26%
Androgen receptor binding - 0.7070 70.70%
Thyroid receptor binding - 0.5882 58.82%
Glucocorticoid receptor binding + 0.5452 54.52%
Aromatase binding + 0.5233 52.33%
PPAR gamma + 0.6045 60.45%
Honey bee toxicity - 0.8094 80.94%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity + 0.6626 66.26%
Fish aquatic toxicity + 0.9637 96.37%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 98.93% 97.29%
CHEMBL3060 Q9Y345 Glycine transporter 2 98.72% 99.17%
CHEMBL2265 P23141 Acyl coenzyme A:cholesterol acyltransferase 96.91% 85.94%
CHEMBL2581 P07339 Cathepsin D 96.49% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.88% 96.09%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 95.81% 92.86%
CHEMBL5255 O00206 Toll-like receptor 4 90.60% 92.50%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 90.47% 100.00%
CHEMBL335 P18031 Protein-tyrosine phosphatase 1B 90.27% 95.17%
CHEMBL4769 O95749 Geranylgeranyl pyrophosphate synthetase 89.17% 92.08%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 88.40% 96.00%
CHEMBL5043 Q6P179 Endoplasmic reticulum aminopeptidase 2 86.12% 91.81%
CHEMBL230 P35354 Cyclooxygenase-2 85.74% 89.63%
CHEMBL3359 P21462 Formyl peptide receptor 1 85.49% 93.56%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 84.78% 94.33%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 84.12% 96.95%
CHEMBL3401 O75469 Pregnane X receptor 83.72% 94.73%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 82.80% 89.34%
CHEMBL2885 P07451 Carbonic anhydrase III 82.73% 87.45%
CHEMBL1781 P11387 DNA topoisomerase I 82.72% 97.00%
CHEMBL4227 P25090 Lipoxin A4 receptor 82.27% 100.00%
CHEMBL1907591 P30926 Neuronal acetylcholine receptor; alpha4/beta4 81.73% 100.00%
CHEMBL1907 P15144 Aminopeptidase N 81.64% 93.31%
CHEMBL1293249 Q13887 Kruppel-like factor 5 80.74% 86.33%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Bryonia alba
Capsicum annuum
Deschampsia antarctica
Elaeagnus angustifolia
Ferula tenuisecta
Murraya koenigii
Portulaca oleracea
Ruta graveolens
Salix reticulata

Cross-Links

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PubChem 44566653
LOTUS LTS0232487
wikiData Q104253024