Phellodendrine

Details

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Internal ID 5d2f60a3-8ddd-4e20-9ba2-0caf47de7478
Taxonomy Alkaloids and derivatives > Protoberberine alkaloids and derivatives
IUPAC Name (7S,13aS)-3,10-dimethoxy-7-methyl-6,8,13,13a-tetrahydro-5H-isoquinolino[2,1-b]isoquinolin-7-ium-2,11-diol
SMILES (Canonical) C[N+]12CCC3=CC(=C(C=C3C1CC4=CC(=C(C=C4C2)OC)O)O)OC
SMILES (Isomeric) C[N@@+]12CCC3=CC(=C(C=C3[C@@H]1CC4=CC(=C(C=C4C2)OC)O)O)OC
InChI InChI=1S/C20H23NO4/c1-21-5-4-12-8-19(24-2)18(23)10-15(12)16(21)6-13-7-17(22)20(25-3)9-14(13)11-21/h7-10,16H,4-6,11H2,1-3H3,(H-,22,23)/p+1/t16-,21-/m0/s1
InChI Key RBBVPNQTBKHOEQ-KKSFZXQISA-O
Popularity 20 references in papers

Physical and Chemical Properties

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Molecular Formula C20H24NO4+
Molecular Weight 342.40 g/mol
Exact Mass 342.17053325 g/mol
Topological Polar Surface Area (TPSA) 58.90 Ų
XlogP 2.60
Atomic LogP (AlogP) 2.92
H-Bond Acceptor 4
H-Bond Donor 2
Rotatable Bonds 2

Synonyms

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Phallodendrin
6873-13-8
OB-5 Compound
AR68S526RB
(7S,13aS)-3,10-dimethoxy-7-methyl-6,8,13,13a-tetrahydro-5H-isoquinolino[2,1-b]isoquinolin-7-ium-2,11-diol
UNII-AR68S526RB
6H-Dibenzo(a,g)quinolizinium, 5,8,13,13a-tetrahydro-2,11-dihydroxy-3,10-dimethoxy-7-methyl-, (7S-cis)-
N-Methylcoreximine
SCHEMBL309711
CHEBI:80886
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Phellodendrine

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.9685 96.85%
Caco-2 + 0.7634 76.34%
Blood Brain Barrier + 0.6500 65.00%
Human oral bioavailability - 0.5000 50.00%
Subcellular localzation Mitochondria 0.3706 37.06%
OATP2B1 inhibitior - 0.8546 85.46%
OATP1B1 inhibitior + 0.9231 92.31%
OATP1B3 inhibitior + 0.9498 94.98%
MATE1 inhibitior - 0.6800 68.00%
OCT2 inhibitior - 0.5000 50.00%
BSEP inhibitior - 0.7664 76.64%
P-glycoprotein inhibitior - 0.4821 48.21%
P-glycoprotein substrate - 0.6888 68.88%
CYP3A4 substrate + 0.5812 58.12%
CYP2C9 substrate - 0.8000 80.00%
CYP2D6 substrate + 0.5000 50.00%
CYP3A4 inhibition - 0.9152 91.52%
CYP2C9 inhibition - 0.9221 92.21%
CYP2C19 inhibition - 0.8842 88.42%
CYP2D6 inhibition - 0.6032 60.32%
CYP1A2 inhibition - 0.6540 65.40%
CYP2C8 inhibition + 0.4580 45.80%
CYP inhibitory promiscuity - 0.9570 95.70%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6706 67.06%
Eye corrosion - 0.9893 98.93%
Eye irritation - 0.7447 74.47%
Skin irritation - 0.7592 75.92%
Skin corrosion - 0.9333 93.33%
Ames mutagenesis - 0.7354 73.54%
Human Ether-a-go-go-Related Gene inhibition + 0.6472 64.72%
Micronuclear + 0.5500 55.00%
Hepatotoxicity - 0.7000 70.00%
skin sensitisation - 0.8800 88.00%
Respiratory toxicity - 0.5000 50.00%
Reproductive toxicity + 0.8778 87.78%
Mitochondrial toxicity + 0.7250 72.50%
Nephrotoxicity - 0.8300 83.00%
Acute Oral Toxicity (c) III 0.6327 63.27%
Estrogen receptor binding + 0.7880 78.80%
Androgen receptor binding - 0.5441 54.41%
Thyroid receptor binding + 0.7613 76.13%
Glucocorticoid receptor binding + 0.6980 69.80%
Aromatase binding - 0.5279 52.79%
PPAR gamma + 0.7109 71.09%
Honey bee toxicity - 0.8165 81.65%
Biodegradation - 0.9000 90.00%
Crustacea aquatic toxicity + 0.5851 58.51%
Fish aquatic toxicity + 0.8761 87.61%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.08% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.88% 91.11%
CHEMBL241 Q14432 Phosphodiesterase 3A 94.46% 92.94%
CHEMBL3192 Q9BY41 Histone deacetylase 8 91.05% 93.99%
CHEMBL2041 P07949 Tyrosine-protein kinase receptor RET 90.89% 91.79%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 88.82% 94.45%
CHEMBL217 P14416 Dopamine D2 receptor 88.01% 95.62%
CHEMBL2056 P21728 Dopamine D1 receptor 87.67% 91.00%
CHEMBL3060 Q9Y345 Glycine transporter 2 86.89% 99.17%
CHEMBL2535 P11166 Glucose transporter 86.45% 98.75%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 86.39% 85.14%
CHEMBL261 P00915 Carbonic anhydrase I 85.78% 96.76%
CHEMBL2581 P07339 Cathepsin D 85.75% 98.95%
CHEMBL5608 Q16288 NT-3 growth factor receptor 85.37% 95.89%
CHEMBL3438 Q05513 Protein kinase C zeta 85.05% 88.48%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 84.87% 95.56%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.80% 86.33%
CHEMBL213 P08588 Beta-1 adrenergic receptor 81.31% 95.56%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 80.31% 95.89%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Corydalis ternata
Corydalis turtschaninovii
Corydalis yanhusuo
Phellodendron amurense
Phellodendron chinense
Xylopia parviflora

Cross-Links

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PubChem 3081405
NPASS NPC34511
LOTUS LTS0191638
wikiData Q7181238