Pachyphyllone

Details

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Internal ID 2e8b82a8-6a0c-4705-8aa3-e21c14c091a7
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Diterpenoids
IUPAC Name (1R,4S,9R)-11-hydroxy-5,5-dimethyl-13-propan-2-yl-15-oxatetracyclo[7.5.2.01,10.04,9]hexadeca-10,13-dien-12-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C20H28O3/c1-12(2)13-10-20-9-6-14-18(3,4)7-5-8-19(14,11-23-20)17(20)16(22)15(13)21/h10,12,14,22H,5-9,11H2,1-4H3/t14-,19+,20+/m0/s1
InChI Key UXYAZXBEJDOGCG-VHKYSDTDSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C20H28O3
Molecular Weight 316.40 g/mol
Exact Mass 316.20384475 g/mol
Topological Polar Surface Area (TPSA) 46.50 Ų
XlogP 3.90
Atomic LogP (AlogP) 4.34
H-Bond Acceptor 3
H-Bond Donor 1
Rotatable Bonds 1

Synonyms

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DTXSID101030160
RefChem:169454
DTXCID301515271
(1R,4S,9R)-11-hydroxy-5,5-dimethyl-13-propan-2-yl-15-oxatetracyclo(7.5.2.01,10.04,9)hexadeca-10,13-dien-12-one
CHEMBL491878
Q7122190

2D Structure

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2D Structure of Pachyphyllone

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9952 99.52%
Caco-2 + 0.7851 78.51%
Blood Brain Barrier + 0.7000 70.00%
Human oral bioavailability - 0.6000 60.00%
Subcellular localzation Mitochondria 0.7760 77.60%
OATP2B1 inhibitior - 0.8597 85.97%
OATP1B1 inhibitior + 0.8468 84.68%
OATP1B3 inhibitior + 0.9865 98.65%
MATE1 inhibitior - 0.8600 86.00%
OCT2 inhibitior + 0.7500 75.00%
BSEP inhibitior - 0.4868 48.68%
P-glycoprotein inhibitior - 0.7857 78.57%
P-glycoprotein substrate - 0.7590 75.90%
CYP3A4 substrate + 0.6256 62.56%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8482 84.82%
CYP3A4 inhibition - 0.9339 93.39%
CYP2C9 inhibition - 0.7591 75.91%
CYP2C19 inhibition - 0.7561 75.61%
CYP2D6 inhibition - 0.9270 92.70%
CYP1A2 inhibition - 0.6062 60.62%
CYP2C8 inhibition - 0.7881 78.81%
CYP inhibitory promiscuity - 0.8464 84.64%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.4903 49.03%
Eye corrosion - 0.9889 98.89%
Eye irritation - 0.8972 89.72%
Skin irritation - 0.5315 53.15%
Skin corrosion - 0.9400 94.00%
Ames mutagenesis - 0.7000 70.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5511 55.11%
Micronuclear - 0.8900 89.00%
Hepatotoxicity - 0.5689 56.89%
skin sensitisation - 0.7922 79.22%
Respiratory toxicity + 0.5667 56.67%
Reproductive toxicity + 0.8889 88.89%
Mitochondrial toxicity + 0.6250 62.50%
Nephrotoxicity + 0.7814 78.14%
Acute Oral Toxicity (c) III 0.7033 70.33%
Estrogen receptor binding + 0.8201 82.01%
Androgen receptor binding + 0.5332 53.32%
Thyroid receptor binding + 0.7622 76.22%
Glucocorticoid receptor binding + 0.8498 84.98%
Aromatase binding + 0.5934 59.34%
PPAR gamma + 0.7592 75.92%
Honey bee toxicity - 0.7624 76.24%
Biodegradation - 0.9000 90.00%
Crustacea aquatic toxicity + 0.5600 56.00%
Fish aquatic toxicity + 0.9838 98.38%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.64% 91.11%
CHEMBL1937 Q92769 Histone deacetylase 2 97.54% 94.75%
CHEMBL2581 P07339 Cathepsin D 95.83% 98.95%
CHEMBL253 P34972 Cannabinoid CB2 receptor 95.33% 97.25%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 95.30% 94.45%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.90% 95.56%
CHEMBL1806 P11388 DNA topoisomerase II alpha 89.88% 89.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 89.66% 100.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 89.38% 99.23%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 89.38% 90.71%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 88.74% 96.38%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 88.43% 93.40%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.61% 95.89%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 86.64% 96.09%
CHEMBL5203 P33316 dUTP pyrophosphatase 85.04% 99.18%
CHEMBL3137262 O60341 LSD1/CoREST complex 84.44% 97.09%
CHEMBL4040 P28482 MAP kinase ERK2 84.16% 83.82%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 83.36% 82.69%
CHEMBL3401 O75469 Pregnane X receptor 82.21% 94.73%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 81.89% 93.04%
CHEMBL5103 Q969S8 Histone deacetylase 10 81.45% 90.08%
CHEMBL218 P21554 Cannabinoid CB1 receptor 80.41% 96.61%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Salvia clevelandii
Salvia pachyphylla

Cross-Links

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PubChem 44566415
NPASS NPC38952
ChEMBL CHEMBL491878