Nodosin

Details

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Internal ID ba67b2c1-cbcc-4249-8a78-5819a8ba4854
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene lactones > Diterpene lactones
IUPAC Name (1S,4S,8R,9R,12S,13S,14R,16S)-9,14-dihydroxy-7,7-dimethyl-17-methylidene-3,10-dioxapentacyclo[14.2.1.01,13.04,12.08,12]nonadecane-2,18-dione
SMILES (Canonical) CC1(CCC2C3(C1C(OC3)O)C4C(CC5CC4(C(=O)C5=C)C(=O)O2)O)C
SMILES (Isomeric) CC1(CC[C@H]2[C@]3([C@@H]1[C@@H](OC3)O)[C@@H]4[C@@H](C[C@@H]5C[C@]4(C(=O)C5=C)C(=O)O2)O)C
InChI InChI=1S/C20H26O6/c1-9-10-6-11(21)13-19(7-10,15(9)22)17(24)26-12-4-5-18(2,3)14-16(23)25-8-20(12,13)14/h10-14,16,21,23H,1,4-8H2,2-3H3/t10-,11-,12+,13-,14-,16-,19+,20+/m1/s1
InChI Key WZYJEEIAFBHYJS-SONIPUFESA-N
Popularity 9 references in papers

Physical and Chemical Properties

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Molecular Formula C20H26O6
Molecular Weight 362.40 g/mol
Exact Mass 362.17293854 g/mol
Topological Polar Surface Area (TPSA) 93.10 Ų
XlogP 1.50
Atomic LogP (AlogP) 1.20
H-Bond Acceptor 6
H-Bond Donor 2
Rotatable Bonds 0

Synonyms

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10391-09-0
CHEBI:70379
(1S,4S,8R,9R,12S,13S,14R,16S)-9,14-dihydroxy-7,7-dimethyl-17-methylidene-3,10-dioxapentacyclo[14.2.1.01,13.04,12.08,12]nonadecane-2,18-dione
11-Deacetylsinuolatin E; NSC 285659; Nodosin (terpene)
CHEMBL510160
HY-N3181
AKOS032962396
MS-25755
CS-0023521
Q27138718

2D Structure

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2D Structure of Nodosin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9752 97.52%
Caco-2 - 0.5239 52.39%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.6429 64.29%
Subcellular localzation Mitochondria 0.8425 84.25%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8361 83.61%
OATP1B3 inhibitior + 0.9230 92.30%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.6146 61.46%
BSEP inhibitior - 0.8307 83.07%
P-glycoprotein inhibitior - 0.7596 75.96%
P-glycoprotein substrate - 0.5890 58.90%
CYP3A4 substrate + 0.6811 68.11%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8571 85.71%
CYP3A4 inhibition - 0.7485 74.85%
CYP2C9 inhibition - 0.8372 83.72%
CYP2C19 inhibition - 0.9162 91.62%
CYP2D6 inhibition - 0.9359 93.59%
CYP1A2 inhibition - 0.8678 86.78%
CYP2C8 inhibition - 0.6613 66.13%
CYP inhibitory promiscuity - 0.9588 95.88%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5406 54.06%
Eye corrosion - 0.9893 98.93%
Eye irritation - 0.9248 92.48%
Skin irritation + 0.4918 49.18%
Skin corrosion - 0.9137 91.37%
Ames mutagenesis - 0.6100 61.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5216 52.16%
Micronuclear - 0.8200 82.00%
Hepatotoxicity + 0.5875 58.75%
skin sensitisation - 0.8154 81.54%
Respiratory toxicity + 0.5889 58.89%
Reproductive toxicity + 0.9000 90.00%
Mitochondrial toxicity + 0.8500 85.00%
Nephrotoxicity + 0.8438 84.38%
Acute Oral Toxicity (c) I 0.4229 42.29%
Estrogen receptor binding + 0.7760 77.60%
Androgen receptor binding + 0.6622 66.22%
Thyroid receptor binding + 0.6378 63.78%
Glucocorticoid receptor binding + 0.7409 74.09%
Aromatase binding + 0.6171 61.71%
PPAR gamma + 0.6333 63.33%
Honey bee toxicity - 0.7572 75.72%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.5300 53.00%
Fish aquatic toxicity + 0.9943 99.43%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3137262 O60341 LSD1/CoREST complex 94.56% 97.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 92.41% 94.45%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 91.52% 91.11%
CHEMBL1937 Q92769 Histone deacetylase 2 91.50% 94.75%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.26% 96.09%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 91.11% 96.38%
CHEMBL1994 P08235 Mineralocorticoid receptor 88.36% 100.00%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 86.53% 82.69%
CHEMBL253 P34972 Cannabinoid CB2 receptor 85.98% 97.25%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 85.75% 95.56%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 85.18% 97.14%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 84.21% 85.14%
CHEMBL1871 P10275 Androgen Receptor 84.11% 96.43%
CHEMBL226 P30542 Adenosine A1 receptor 83.68% 95.93%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 83.42% 99.23%
CHEMBL1806 P11388 DNA topoisomerase II alpha 81.00% 89.00%
CHEMBL1902 P62942 FK506-binding protein 1A 80.61% 97.05%

Cross-Links

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PubChem 10248089
NPASS NPC88833
ChEMBL CHEMBL510160
LOTUS LTS0266703
wikiData Q27138718