Glaucarubin

Details

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Internal ID 64b3dc97-0283-4780-97f3-49d445fa816d
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene lactones > Quassinoids
IUPAC Name (4,5,16,17-tetrahydroxy-6,14,18-trimethyl-9-oxo-3,10-dioxapentacyclo[9.8.0.01,7.04,19.013,18]nonadec-14-en-8-yl) 2-hydroxy-2-methylbutanoate
SMILES (Canonical) CCC(C)(C(=O)OC1C2C(C(C3(C4C2(CO3)C(CC5C4(C(C(C=C5C)O)O)C)OC1=O)O)O)C)O
SMILES (Isomeric) CCC(C)(C(=O)OC1C2C(C(C3(C4C2(CO3)C(CC5C4(C(C(C=C5C)O)O)C)OC1=O)O)O)C)O
InChI InChI=1S/C25H36O10/c1-6-22(4,31)21(30)35-16-15-11(3)17(27)25(32)20-23(5)12(10(2)7-13(26)18(23)28)8-14(34-19(16)29)24(15,20)9-33-25/h7,11-18,20,26-28,31-32H,6,8-9H2,1-5H3
InChI Key LZKVXMYVBSNXER-UHFFFAOYSA-N
Popularity 133 references in papers

Physical and Chemical Properties

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Molecular Formula C25H36O10
Molecular Weight 496.50 g/mol
Exact Mass 496.23084734 g/mol
Topological Polar Surface Area (TPSA) 163.00 Ų
XlogP -0.20
Atomic LogP (AlogP) -0.36
H-Bond Acceptor 10
H-Bond Donor 5
Rotatable Bonds 3

Synonyms

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GLAUCARUBIN
alpha-Kirondrin
MK-53
(4,5,16,17-tetrahydroxy-6,14,18-trimethyl-9-oxo-3,10-dioxapentacyclo[9.8.0.01,7.04,19.013,18]nonadec-14-en-8-yl) 2-hydroxy-2-methylbutanoate
1448-23-3
b-Kirondrin
SCHEMBL674501
PD027687
SMR001547889

2D Structure

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2D Structure of Glaucarubin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9648 96.48%
Caco-2 - 0.7620 76.20%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.5857 58.57%
Subcellular localzation Mitochondria 0.7221 72.21%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8364 83.64%
OATP1B3 inhibitior + 0.9491 94.91%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior + 0.6922 69.22%
P-glycoprotein inhibitior - 0.5214 52.14%
P-glycoprotein substrate + 0.8452 84.52%
CYP3A4 substrate + 0.7091 70.91%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8686 86.86%
CYP3A4 inhibition - 0.5196 51.96%
CYP2C9 inhibition - 0.7913 79.13%
CYP2C19 inhibition - 0.8453 84.53%
CYP2D6 inhibition - 0.9477 94.77%
CYP1A2 inhibition - 0.8543 85.43%
CYP2C8 inhibition + 0.5000 50.00%
CYP inhibitory promiscuity - 0.8693 86.93%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5279 52.79%
Eye corrosion - 0.9899 98.99%
Eye irritation - 0.9381 93.81%
Skin irritation + 0.5133 51.33%
Skin corrosion - 0.9297 92.97%
Ames mutagenesis - 0.6300 63.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5870 58.70%
Micronuclear - 0.6400 64.00%
Hepatotoxicity + 0.6533 65.33%
skin sensitisation - 0.8750 87.50%
Respiratory toxicity + 0.7222 72.22%
Reproductive toxicity + 0.9000 90.00%
Mitochondrial toxicity + 0.8250 82.50%
Nephrotoxicity + 0.6343 63.43%
Acute Oral Toxicity (c) III 0.8114 81.14%
Estrogen receptor binding + 0.7691 76.91%
Androgen receptor binding + 0.6733 67.33%
Thyroid receptor binding - 0.4934 49.34%
Glucocorticoid receptor binding + 0.7009 70.09%
Aromatase binding + 0.6951 69.51%
PPAR gamma + 0.6272 62.72%
Honey bee toxicity - 0.6945 69.45%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.5100 51.00%
Fish aquatic toxicity + 0.9861 98.61%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL253 P34972 Cannabinoid CB2 receptor 99.13% 97.25%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.85% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.96% 96.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 93.51% 86.33%
CHEMBL2996 Q05655 Protein kinase C delta 91.14% 97.79%
CHEMBL2581 P07339 Cathepsin D 90.84% 98.95%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 90.03% 96.77%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 87.61% 94.45%
CHEMBL3137262 O60341 LSD1/CoREST complex 86.12% 97.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 86.10% 89.00%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 85.78% 96.47%
CHEMBL5966 P55899 IgG receptor FcRn large subunit p51 84.13% 90.93%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 83.98% 95.56%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 83.84% 91.07%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 83.70% 96.95%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 83.64% 85.14%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 83.37% 99.23%
CHEMBL1994 P08235 Mineralocorticoid receptor 82.99% 100.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 82.42% 94.00%
CHEMBL241 Q14432 Phosphodiesterase 3A 82.05% 92.94%
CHEMBL3922 P50579 Methionine aminopeptidase 2 82.03% 97.28%
CHEMBL4051 P13569 Cystic fibrosis transmembrane conductance regulator 80.47% 95.71%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Ailanthus excelsus
Simarouba glauca

Cross-Links

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PubChem 3321199
LOTUS LTS0242733
wikiData Q105159963