ganomycin B

Details

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Internal ID 9ccec854-3e75-4f44-8cc1-5b5c641139d0
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Sesquiterpenoids
IUPAC Name (2Z,5E)-2-[2-(2,5-dihydroxyphenyl)ethylidene]-6,10-dimethylundeca-5,9-dienoic acid
SMILES (Canonical) CC(=CCCC(=CCCC(=CCC1=C(C=CC(=C1)O)O)C(=O)O)C)C
SMILES (Isomeric) CC(=CCC/C(=C/CC/C(=C/CC1=C(C=CC(=C1)O)O)/C(=O)O)/C)C
InChI InChI=1S/C21H28O4/c1-15(2)6-4-7-16(3)8-5-9-17(21(24)25)10-11-18-14-19(22)12-13-20(18)23/h6,8,10,12-14,22-23H,4-5,7,9,11H2,1-3H3,(H,24,25)/b16-8+,17-10-
InChI Key HVLZHPCKWVKAQH-IRQOBONWSA-N
Popularity 5 references in papers

Physical and Chemical Properties

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Molecular Formula C21H28O4
Molecular Weight 344.40 g/mol
Exact Mass 344.19875937 g/mol
Topological Polar Surface Area (TPSA) 77.80 Ų
XlogP 5.50
Atomic LogP (AlogP) 5.12
H-Bond Acceptor 3
H-Bond Donor 3
Rotatable Bonds 9

Synonyms

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CHEMBL496060
SCHEMBL12249396
HVLZHPCKWVKAQH-IRQOBONWSA-N
BDBM50232007
(2Z,5E)-2-[2-(2,5-dihydroxyphenyl)ethylidene]-6,10-dimethylundeca-5,9-dienoic acid

2D Structure

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2D Structure of ganomycin B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9914 99.14%
Caco-2 - 0.6584 65.84%
Blood Brain Barrier - 0.7250 72.50%
Human oral bioavailability - 0.7000 70.00%
Subcellular localzation Mitochondria 0.8992 89.92%
OATP2B1 inhibitior - 0.5693 56.93%
OATP1B1 inhibitior + 0.9072 90.72%
OATP1B3 inhibitior + 0.8734 87.34%
MATE1 inhibitior - 0.8000 80.00%
OCT2 inhibitior - 0.7250 72.50%
BSEP inhibitior + 0.8337 83.37%
P-glycoprotein inhibitior - 0.6911 69.11%
P-glycoprotein substrate - 0.8760 87.60%
CYP3A4 substrate - 0.5557 55.57%
CYP2C9 substrate - 0.5695 56.95%
CYP2D6 substrate - 0.8972 89.72%
CYP3A4 inhibition + 0.5437 54.37%
CYP2C9 inhibition + 0.5759 57.59%
CYP2C19 inhibition + 0.6400 64.00%
CYP2D6 inhibition - 0.7271 72.71%
CYP1A2 inhibition + 0.7280 72.80%
CYP2C8 inhibition - 0.7147 71.47%
CYP inhibitory promiscuity - 0.5123 51.23%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.7377 73.77%
Carcinogenicity (trinary) Non-required 0.7218 72.18%
Eye corrosion - 0.9874 98.74%
Eye irritation - 0.6488 64.88%
Skin irritation - 0.6943 69.43%
Skin corrosion - 0.9460 94.60%
Ames mutagenesis - 0.7300 73.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5425 54.25%
Micronuclear - 0.9300 93.00%
Hepatotoxicity - 0.5125 51.25%
skin sensitisation + 0.5682 56.82%
Respiratory toxicity - 0.5111 51.11%
Reproductive toxicity + 0.6222 62.22%
Mitochondrial toxicity - 0.5125 51.25%
Nephrotoxicity - 0.5881 58.81%
Acute Oral Toxicity (c) III 0.5001 50.01%
Estrogen receptor binding + 0.7604 76.04%
Androgen receptor binding + 0.6505 65.05%
Thyroid receptor binding + 0.6352 63.52%
Glucocorticoid receptor binding + 0.6494 64.94%
Aromatase binding + 0.5711 57.11%
PPAR gamma + 0.8851 88.51%
Honey bee toxicity - 0.9248 92.48%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.6300 63.00%
Fish aquatic toxicity + 1.0000 100.00%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.97% 91.11%
CHEMBL4769 O95749 Geranylgeranyl pyrophosphate synthetase 95.63% 92.08%
CHEMBL2581 P07339 Cathepsin D 94.47% 98.95%
CHEMBL3401 O75469 Pregnane X receptor 91.32% 94.73%
CHEMBL3060 Q9Y345 Glycine transporter 2 90.76% 99.17%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 89.52% 96.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.96% 86.33%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 86.76% 95.56%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 86.49% 94.45%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 85.52% 99.15%
CHEMBL4208 P20618 Proteasome component C5 83.45% 90.00%
CHEMBL2107 P61073 C-X-C chemokine receptor type 4 83.17% 93.10%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 83.01% 90.71%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Juniperus occidentalis
Vigna mungo

Cross-Links

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PubChem 10246918
NPASS NPC228609
ChEMBL CHEMBL496060
LOTUS LTS0054541
wikiData Q77506187