(2R)-2-[(1R)-1-hydroxy-1-[(8R,9S,10R,13R,14R,17S)-14-hydroxy-10,13-dimethyl-1-oxo-7,8,9,11,12,15,16,17-octahydro-2H-cyclopenta[a]phenanthren-17-yl]ethyl]-5-(hydroxymethyl)-4-methyl-2,3-dihydropyran-6-one

Details

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Internal ID 37700b7c-e7cf-4805-b3ee-c85228c759b3
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroid lactones > Withanolides and derivatives
IUPAC Name (2R)-2-[(1R)-1-hydroxy-1-[(8R,9S,10R,13R,14R,17S)-14-hydroxy-10,13-dimethyl-1-oxo-7,8,9,11,12,15,16,17-octahydro-2H-cyclopenta[a]phenanthren-17-yl]ethyl]-5-(hydroxymethyl)-4-methyl-2,3-dihydropyran-6-one
SMILES (Canonical) CC1=C(C(=O)OC(C1)C(C)(C2CCC3(C2(CCC4C3CC=C5C4(C(=O)CC=C5)C)C)O)O)CO
SMILES (Isomeric) CC1=C(C(=O)O[C@H](C1)[C@@](C)([C@H]2CC[C@@]3([C@@]2(CC[C@H]4[C@H]3CC=C5[C@@]4(C(=O)CC=C5)C)C)O)O)CO
InChI InChI=1S/C28H38O6/c1-16-14-23(34-24(31)18(16)15-29)27(4,32)21-11-13-28(33)20-9-8-17-6-5-7-22(30)26(17,3)19(20)10-12-25(21,28)2/h5-6,8,19-21,23,29,32-33H,7,9-15H2,1-4H3/t19-,20+,21-,23+,25+,26-,27+,28+/m0/s1
InChI Key DZDCMRGAFABKLR-HZRISEJCSA-N
Popularity 3 references in papers

Physical and Chemical Properties

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Molecular Formula C28H38O6
Molecular Weight 470.60 g/mol
Exact Mass 470.26683893 g/mol
Topological Polar Surface Area (TPSA) 104.00 Ų
XlogP 2.70
Atomic LogP (AlogP) 3.40
H-Bond Acceptor 6
H-Bond Donor 3
Rotatable Bonds 3

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R)-2-[(1R)-1-hydroxy-1-[(8R,9S,10R,13R,14R,17S)-14-hydroxy-10,13-dimethyl-1-oxo-7,8,9,11,12,15,16,17-octahydro-2H-cyclopenta[a]phenanthren-17-yl]ethyl]-5-(hydroxymethyl)-4-methyl-2,3-dihydropyran-6-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9635 96.35%
Caco-2 - 0.5705 57.05%
Blood Brain Barrier + 0.7250 72.50%
Human oral bioavailability + 0.5286 52.86%
Subcellular localzation Mitochondria 0.8379 83.79%
OATP2B1 inhibitior - 0.8644 86.44%
OATP1B1 inhibitior + 0.8560 85.60%
OATP1B3 inhibitior + 0.9390 93.90%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior + 0.6345 63.45%
BSEP inhibitior + 0.9378 93.78%
P-glycoprotein inhibitior + 0.6392 63.92%
P-glycoprotein substrate + 0.5000 50.00%
CYP3A4 substrate + 0.7094 70.94%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.9168 91.68%
CYP3A4 inhibition - 0.6375 63.75%
CYP2C9 inhibition - 0.9336 93.36%
CYP2C19 inhibition - 0.9443 94.43%
CYP2D6 inhibition - 0.9618 96.18%
CYP1A2 inhibition - 0.8516 85.16%
CYP2C8 inhibition + 0.5000 50.00%
CYP inhibitory promiscuity - 0.9506 95.06%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5615 56.15%
Eye corrosion - 0.9926 99.26%
Eye irritation - 0.9696 96.96%
Skin irritation + 0.7271 72.71%
Skin corrosion - 0.9417 94.17%
Ames mutagenesis - 0.6600 66.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6730 67.30%
Micronuclear - 0.8100 81.00%
Hepatotoxicity - 0.5301 53.01%
skin sensitisation - 0.9389 93.89%
Respiratory toxicity + 0.7778 77.78%
Reproductive toxicity + 0.9667 96.67%
Mitochondrial toxicity + 0.8500 85.00%
Nephrotoxicity + 0.6087 60.87%
Acute Oral Toxicity (c) III 0.6078 60.78%
Estrogen receptor binding + 0.8730 87.30%
Androgen receptor binding + 0.7594 75.94%
Thyroid receptor binding + 0.6698 66.98%
Glucocorticoid receptor binding + 0.8739 87.39%
Aromatase binding + 0.8160 81.60%
PPAR gamma + 0.6072 60.72%
Honey bee toxicity - 0.8328 83.28%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity + 0.6000 60.00%
Fish aquatic toxicity + 0.9645 96.45%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL253 P34972 Cannabinoid CB2 receptor 98.35% 97.25%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 94.01% 91.11%
CHEMBL3192 Q9BY41 Histone deacetylase 8 92.74% 93.99%
CHEMBL1937 Q92769 Histone deacetylase 2 91.92% 94.75%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.65% 95.56%
CHEMBL2581 P07339 Cathepsin D 89.66% 98.95%
CHEMBL3137262 O60341 LSD1/CoREST complex 89.21% 97.09%
CHEMBL2996 Q05655 Protein kinase C delta 89.15% 97.79%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 88.34% 82.69%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 87.75% 99.23%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.42% 86.33%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 86.73% 93.04%
CHEMBL5103 Q969S8 Histone deacetylase 10 85.71% 90.08%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 85.43% 94.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 84.76% 100.00%
CHEMBL3359 P21462 Formyl peptide receptor 1 84.59% 93.56%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 82.75% 97.14%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 82.70% 96.09%
CHEMBL3310 Q96DB2 Histone deacetylase 11 82.60% 88.56%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 82.54% 92.62%
CHEMBL3401 O75469 Pregnane X receptor 81.48% 94.73%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Ajuga parviflora
Withania coagulans
Withania somnifera

Cross-Links

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PubChem 21679029
LOTUS LTS0223913
wikiData Q104991747