Epimedin-A

Details

Top
Internal ID f1ec8e1e-8e16-4377-ac1f-1225b78dc45f
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavonoid glycosides > Flavonoid O-glycosides > Flavonoid-3-O-glycosides
IUPAC Name 3-[(2S,3R,4R,5R,6S)-4,5-dihydroxy-6-methyl-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxy-5-hydroxy-2-(4-methoxyphenyl)-8-(3-methylbut-2-enyl)-7-[(1R,2R,3S,4R,5R)-2,3,4-trihydroxy-5-(hydroxymethyl)cyclohexyl]oxychromen-4-one
SMILES (Canonical) CC1C(C(C(C(O1)OC2=C(OC3=C(C2=O)C(=CC(=C3CC=C(C)C)OC4CC(C(C(C4O)O)O)CO)O)C5=CC=C(C=C5)OC)OC6C(C(C(C(O6)CO)O)O)O)O)O
SMILES (Isomeric) C[C@H]1[C@@H]([C@H]([C@H]([C@@H](O1)OC2=C(OC3=C(C2=O)C(=CC(=C3CC=C(C)C)O[C@@H]4C[C@@H]([C@H]([C@@H]([C@H]4O)O)O)CO)O)C5=CC=C(C=C5)OC)O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO)O)O)O)O)O
InChI InChI=1S/C40H52O19/c1-15(2)5-10-20-22(55-23-11-18(13-41)27(45)31(49)28(23)46)12-21(43)25-30(48)37(35(57-36(20)25)17-6-8-19(53-4)9-7-17)58-40-38(33(51)26(44)16(3)54-40)59-39-34(52)32(50)29(47)24(14-42)56-39/h5-9,12,16,18,23-24,26-29,31-34,38-47,49-52H,10-11,13-14H2,1-4H3/t16-,18+,23+,24+,26-,27+,28-,29+,31-,32-,33+,34+,38+,39-,40-/m0/s1
InChI Key OKOVXNDIKBDKAA-OIAFWOJHSA-N
Popularity 7 references in papers

Physical and Chemical Properties

Top
Molecular Formula C40H52O19
Molecular Weight 836.80 g/mol
Exact Mass 836.31027942 g/mol
Topological Polar Surface Area (TPSA) 304.00 Ų
XlogP 0.70
Atomic LogP (AlogP) -1.44
H-Bond Acceptor 19
H-Bond Donor 11
Rotatable Bonds 12

Synonyms

Top
DTXSID40704898
AKOS025402177
AC-6039

2D Structure

Top
2D Structure of Epimedin-A

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8164 81.64%
Caco-2 - 0.9232 92.32%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.6461 64.61%
OATP2B1 inhibitior - 0.7228 72.28%
OATP1B1 inhibitior + 0.8740 87.40%
OATP1B3 inhibitior + 0.9556 95.56%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior + 0.9101 91.01%
P-glycoprotein inhibitior + 0.6772 67.72%
P-glycoprotein substrate + 0.6478 64.78%
CYP3A4 substrate + 0.7031 70.31%
CYP2C9 substrate - 0.8223 82.23%
CYP2D6 substrate - 0.8472 84.72%
CYP3A4 inhibition - 0.9605 96.05%
CYP2C9 inhibition - 0.7520 75.20%
CYP2C19 inhibition - 0.6564 65.64%
CYP2D6 inhibition - 0.8523 85.23%
CYP1A2 inhibition - 0.7720 77.20%
CYP2C8 inhibition + 0.7159 71.59%
CYP inhibitory promiscuity - 0.5971 59.71%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.7249 72.49%
Eye corrosion - 0.9887 98.87%
Eye irritation - 0.9101 91.01%
Skin irritation - 0.8116 81.16%
Skin corrosion - 0.9490 94.90%
Ames mutagenesis - 0.5454 54.54%
Human Ether-a-go-go-Related Gene inhibition + 0.7898 78.98%
Micronuclear - 0.5167 51.67%
Hepatotoxicity - 0.6125 61.25%
skin sensitisation - 0.8660 86.60%
Respiratory toxicity + 0.6667 66.67%
Reproductive toxicity + 0.8556 85.56%
Mitochondrial toxicity - 0.5125 51.25%
Nephrotoxicity - 0.8491 84.91%
Acute Oral Toxicity (c) III 0.6499 64.99%
Estrogen receptor binding + 0.8156 81.56%
Androgen receptor binding + 0.6680 66.80%
Thyroid receptor binding + 0.5252 52.52%
Glucocorticoid receptor binding + 0.5899 58.99%
Aromatase binding + 0.5624 56.24%
PPAR gamma + 0.7228 72.28%
Honey bee toxicity - 0.6578 65.78%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.6200 62.00%
Fish aquatic toxicity + 0.9594 95.94%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.93% 91.11%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 96.83% 94.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 95.26% 89.00%
CHEMBL2581 P07339 Cathepsin D 94.70% 98.95%
CHEMBL1293249 Q13887 Kruppel-like factor 5 93.84% 86.33%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 93.38% 95.56%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 92.76% 85.14%
CHEMBL1951 P21397 Monoamine oxidase A 91.99% 91.49%
CHEMBL3060 Q9Y345 Glycine transporter 2 91.91% 99.17%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.23% 94.45%
CHEMBL3137262 O60341 LSD1/CoREST complex 91.05% 97.09%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 90.36% 96.00%
CHEMBL3401 O75469 Pregnane X receptor 89.77% 94.73%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 89.50% 86.92%
CHEMBL4208 P20618 Proteasome component C5 89.13% 90.00%
CHEMBL241 Q14432 Phosphodiesterase 3A 88.55% 92.94%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 87.89% 99.15%
CHEMBL3714130 P46095 G-protein coupled receptor 6 87.47% 97.36%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 85.55% 96.95%
CHEMBL5608 Q16288 NT-3 growth factor receptor 85.44% 95.89%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 82.49% 95.83%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Cistanche deserticola
Epimedium brevicornu
Epimedium koreanum
Rehmannia glutinosa

Cross-Links

Top
PubChem 53486399
NPASS NPC146374