Cytoglobosin D

Details

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Internal ID 7f483e43-b35d-4eb3-b1f9-324b160d923d
Taxonomy Organoheterocyclic compounds > Isoindoles and derivatives > Isoindolines > Isoindolones
IUPAC Name (1S,3E,5S,6R,7E,9S,11E,13S,16S,17R,18S)-5,6-dihydroxy-18-(1H-indol-3-ylmethyl)-7,9,15,16-tetramethyl-19-azatricyclo[11.7.0.01,17]icosa-3,7,11,14-tetraene-2,20-dione
SMILES (Canonical) CC1CC=CC2C=C(C(C3C2(C(=O)C=CC(C(C(=C1)C)O)O)C(=O)NC3CC4=CNC5=CC=CC=C54)C)C
SMILES (Isomeric) C[C@H]\1C/C=C/[C@H]2C=C([C@H]([C@@H]3[C@@]2(C(=O)/C=C/[C@@H]([C@@H](/C(=C1)/C)O)O)C(=O)N[C@H]3CC4=CNC5=CC=CC=C54)C)C
InChI InChI=1S/C32H38N2O4/c1-18-8-7-9-23-15-19(2)21(4)29-26(16-22-17-33-25-11-6-5-10-24(22)25)34-31(38)32(23,29)28(36)13-12-27(35)30(37)20(3)14-18/h5-7,9-15,17-18,21,23,26-27,29-30,33,35,37H,8,16H2,1-4H3,(H,34,38)/b9-7+,13-12+,20-14+/t18-,21+,23-,26-,27-,29-,30+,32+/m0/s1
InChI Key PSEVHIVYAHBJDR-HMIIDTQCSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C32H38N2O4
Molecular Weight 514.70 g/mol
Exact Mass 514.28315770 g/mol
Topological Polar Surface Area (TPSA) 102.00 Ų
XlogP 3.80
Atomic LogP (AlogP) 4.41
H-Bond Acceptor 4
H-Bond Donor 4
Rotatable Bonds 2

Synonyms

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orb1981984
CHEMBL1098275
1221163-96-7
HY-N10202
CS-0372632

2D Structure

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2D Structure of Cytoglobosin D

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9747 97.47%
Caco-2 - 0.7838 78.38%
Blood Brain Barrier - 0.5000 50.00%
Human oral bioavailability - 0.5571 55.71%
Subcellular localzation Plasma membrane 0.4639 46.39%
OATP2B1 inhibitior - 0.8551 85.51%
OATP1B1 inhibitior + 0.8741 87.41%
OATP1B3 inhibitior + 0.9303 93.03%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior + 0.9830 98.30%
P-glycoprotein inhibitior + 0.6964 69.64%
P-glycoprotein substrate + 0.6902 69.02%
CYP3A4 substrate + 0.6962 69.62%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8733 87.33%
CYP3A4 inhibition - 0.8000 80.00%
CYP2C9 inhibition - 0.6926 69.26%
CYP2C19 inhibition - 0.7536 75.36%
CYP2D6 inhibition - 0.8485 84.85%
CYP1A2 inhibition - 0.7868 78.68%
CYP2C8 inhibition + 0.5398 53.98%
CYP inhibitory promiscuity + 0.5827 58.27%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9300 93.00%
Carcinogenicity (trinary) Non-required 0.4268 42.68%
Eye corrosion - 0.9910 99.10%
Eye irritation - 0.9635 96.35%
Skin irritation - 0.7751 77.51%
Skin corrosion - 0.9367 93.67%
Ames mutagenesis - 0.5000 50.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6550 65.50%
Micronuclear + 0.7700 77.00%
Hepatotoxicity + 0.5801 58.01%
skin sensitisation - 0.8547 85.47%
Respiratory toxicity + 0.8111 81.11%
Reproductive toxicity + 0.8667 86.67%
Mitochondrial toxicity + 0.8750 87.50%
Nephrotoxicity - 0.7113 71.13%
Acute Oral Toxicity (c) II 0.4507 45.07%
Estrogen receptor binding + 0.7434 74.34%
Androgen receptor binding + 0.6241 62.41%
Thyroid receptor binding + 0.6551 65.51%
Glucocorticoid receptor binding + 0.7653 76.53%
Aromatase binding + 0.6036 60.36%
PPAR gamma + 0.7302 73.02%
Honey bee toxicity - 0.7157 71.57%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity - 0.5200 52.00%
Fish aquatic toxicity + 0.9241 92.41%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.86% 91.11%
CHEMBL2581 P07339 Cathepsin D 97.14% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 97.09% 95.56%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 94.85% 85.14%
CHEMBL3310 Q96DB2 Histone deacetylase 11 93.84% 88.56%
CHEMBL1806 P11388 DNA topoisomerase II alpha 93.73% 89.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.92% 96.09%
CHEMBL3192 Q9BY41 Histone deacetylase 8 90.46% 93.99%
CHEMBL3137262 O60341 LSD1/CoREST complex 89.73% 97.09%
CHEMBL255 P29275 Adenosine A2b receptor 88.62% 98.59%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 88.23% 94.00%
CHEMBL1937 Q92769 Histone deacetylase 2 88.07% 94.75%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 88.01% 99.23%
CHEMBL5103 Q969S8 Histone deacetylase 10 87.05% 90.08%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 86.20% 92.62%
CHEMBL213 P08588 Beta-1 adrenergic receptor 85.99% 95.56%
CHEMBL2693 Q9UIQ6 Cystinyl aminopeptidase 85.00% 97.64%
CHEMBL2996 Q05655 Protein kinase C delta 83.75% 97.79%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 83.54% 89.62%
CHEMBL2535 P11166 Glucose transporter 82.22% 98.75%
CHEMBL5805 Q9NR97 Toll-like receptor 8 81.61% 96.25%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Eschweilera coriacea
Eucalyptus cladocalyx
Hyptis comaroides
Salvadora persica

Cross-Links

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PubChem 46209919
NPASS NPC46225
ChEMBL CHEMBL1098275
LOTUS LTS0128518
wikiData Q77279610