Crenulatin

Details

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Internal ID 6b522910-9805-4fb7-8eec-04f79ba192d8
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > O-glycosyl compounds
IUPAC Name (2R,3S,4S,5R,6S)-2-(hydroxymethyl)-6-(2-methylbut-3-en-2-yloxy)oxane-3,4,5-triol
SMILES (Canonical) CC(C)(C=C)OC1C(C(C(C(O1)CO)O)O)O
SMILES (Isomeric) CC(C)(C=C)O[C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)CO)O)O)O
InChI InChI=1S/C11H20O6/c1-4-11(2,3)17-10-9(15)8(14)7(13)6(5-12)16-10/h4,6-10,12-15H,1,5H2,2-3H3/t6-,7-,8+,9-,10+/m1/s1
InChI Key ZEGGZNOPAPRAIG-SPFKKGSWSA-N
Popularity 8 references in papers

Physical and Chemical Properties

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Molecular Formula C11H20O6
Molecular Weight 248.27 g/mol
Exact Mass 248.12598835 g/mol
Topological Polar Surface Area (TPSA) 99.40 Ų
XlogP -1.00
Atomic LogP (AlogP) -1.23
H-Bond Acceptor 6
H-Bond Donor 4
Rotatable Bonds 4

Synonyms

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63026-02-8
(2R,3S,4S,5R,6S)-2-(hydroxymethyl)-6-(2-methylbut-3-en-2-yloxy)oxane-3,4,5-triol
MLS002473298
CHEMBL1395434
HMS2213N16
HY-N7930
AKOS040760352
isopentenyl-3-O-beta-D-glucopyranoside
SMR001397385
CS-0138831
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Crenulatin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.8313 83.13%
Caco-2 - 0.8345 83.45%
Blood Brain Barrier + 0.6500 65.00%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.7981 79.81%
OATP2B1 inhibitior - 0.8594 85.94%
OATP1B1 inhibitior + 0.9119 91.19%
OATP1B3 inhibitior + 0.9588 95.88%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior - 0.9690 96.90%
P-glycoprotein inhibitior - 0.9275 92.75%
P-glycoprotein substrate - 0.9849 98.49%
CYP3A4 substrate - 0.5208 52.08%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8494 84.94%
CYP3A4 inhibition - 0.8131 81.31%
CYP2C9 inhibition - 0.8937 89.37%
CYP2C19 inhibition - 0.8758 87.58%
CYP2D6 inhibition - 0.9434 94.34%
CYP1A2 inhibition - 0.9096 90.96%
CYP2C8 inhibition - 0.8989 89.89%
CYP inhibitory promiscuity - 0.9095 90.95%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Non-required 0.6918 69.18%
Eye corrosion - 0.9840 98.40%
Eye irritation - 0.9699 96.99%
Skin irritation - 0.8415 84.15%
Skin corrosion - 0.9373 93.73%
Ames mutagenesis - 0.8200 82.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5363 53.63%
Micronuclear - 0.7541 75.41%
Hepatotoxicity - 0.6875 68.75%
skin sensitisation - 0.7912 79.12%
Respiratory toxicity - 0.8000 80.00%
Reproductive toxicity - 0.5778 57.78%
Mitochondrial toxicity - 0.8625 86.25%
Nephrotoxicity + 0.4581 45.81%
Acute Oral Toxicity (c) III 0.5901 59.01%
Estrogen receptor binding - 0.7663 76.63%
Androgen receptor binding - 0.6254 62.54%
Thyroid receptor binding + 0.5561 55.61%
Glucocorticoid receptor binding - 0.5000 50.00%
Aromatase binding - 0.6040 60.40%
PPAR gamma - 0.6435 64.35%
Honey bee toxicity - 0.7197 71.97%
Biodegradation + 0.5250 52.50%
Crustacea aquatic toxicity - 0.8600 86.00%
Fish aquatic toxicity - 0.4852 48.52%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL1287622 Q9Y468 Lethal(3)malignant brain tumor-like protein 1 39810.7 nM
Potency
via CMAUP

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 92.71% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 90.85% 97.25%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 90.27% 96.09%
CHEMBL226 P30542 Adenosine A1 receptor 86.29% 95.93%
CHEMBL3060 Q9Y345 Glycine transporter 2 86.28% 99.17%
CHEMBL3589 P55263 Adenosine kinase 85.33% 98.05%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 85.10% 86.92%
CHEMBL3401 O75469 Pregnane X receptor 82.96% 94.73%
CHEMBL218 P21554 Cannabinoid CB1 receptor 82.55% 96.61%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Artemisia gmelinii
Citrus maxima
Ferula sinaica
Glehnia littoralis
Nolina microcarpa
Rhodiola chrysanthemifolia subsp. sacra
Rhodiola crenulata
Rhodiola rosea

Cross-Links

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PubChem 5316128
NPASS NPC31496
ChEMBL CHEMBL1395434
LOTUS LTS0073684
wikiData Q105373214