(1S,2S,3'S,4S,4'S,6S,7S,8R,9S,12S,13R,14R,16R)-14-[(2S,3R,4S,5S)-4,5-dihydroxy-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-7,9,13-trimethyl-5'-methylidenespiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-3',4',16-triol

Details

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Internal ID c7de2b62-ac24-4c40-8e49-27faaa6e93b2
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (1S,2S,3'S,4S,4'S,6S,7S,8R,9S,12S,13R,14R,16R)-14-[(2S,3R,4S,5S)-4,5-dihydroxy-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-7,9,13-trimethyl-5'-methylidenespiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-3',4',16-triol
SMILES (Canonical) CC1C2C(CC3C2(CCC4C3CC=C5C4(C(CC(C5)O)OC6C(C(C(CO6)O)O)OC7C(C(C(C(O7)C)O)O)O)C)C)OC18C(C(C(=C)CO8)O)O
SMILES (Isomeric) C[C@H]1[C@H]2[C@H](C[C@@H]3[C@@]2(CC[C@H]4[C@H]3CC=C5[C@@]4([C@@H](C[C@@H](C5)O)O[C@H]6[C@@H]([C@H]([C@H](CO6)O)O)O[C@H]7[C@@H]([C@@H]([C@H]([C@@H](O7)C)O)O)O)C)C)O[C@]18[C@H]([C@H](C(=C)CO8)O)O
InChI InChI=1S/C38H58O14/c1-15-13-48-38(33(46)27(15)41)16(2)26-24(52-38)12-22-20-7-6-18-10-19(39)11-25(37(18,5)21(20)8-9-36(22,26)4)50-35-32(29(43)23(40)14-47-35)51-34-31(45)30(44)28(42)17(3)49-34/h6,16-17,19-35,39-46H,1,7-14H2,2-5H3/t16-,17-,19+,20+,21-,22-,23-,24-,25+,26-,27-,28-,29-,30+,31+,32+,33-,34-,35-,36-,37-,38-/m0/s1
InChI Key ZXEKAAXICIEPTM-VYZHAIAJSA-N
Popularity 5 references in papers

Physical and Chemical Properties

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Molecular Formula C38H58O14
Molecular Weight 738.90 g/mol
Exact Mass 738.38265652 g/mol
Topological Polar Surface Area (TPSA) 217.00 Ų
XlogP -0.60
Atomic LogP (AlogP) -0.14
H-Bond Acceptor 14
H-Bond Donor 8
Rotatable Bonds 4

Synonyms

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(23S,24S)-1beta-(2-O-alpha-L-Rhamnopyranosyl-alpha-L-arabinopyranosyloxy)-5alpha-spirosta-5,25(27)-diene-3beta,23,24-triol

2D Structure

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2D Structure of (1S,2S,3'S,4S,4'S,6S,7S,8R,9S,12S,13R,14R,16R)-14-[(2S,3R,4S,5S)-4,5-dihydroxy-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-7,9,13-trimethyl-5'-methylidenespiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-3',4',16-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8175 81.75%
Caco-2 - 0.8782 87.82%
Blood Brain Barrier - 0.8500 85.00%
Human oral bioavailability - 0.7429 74.29%
Subcellular localzation Mitochondria 0.7013 70.13%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8598 85.98%
OATP1B3 inhibitior + 0.9190 91.90%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.6750 67.50%
BSEP inhibitior - 0.4715 47.15%
P-glycoprotein inhibitior + 0.6984 69.84%
P-glycoprotein substrate + 0.7075 70.75%
CYP3A4 substrate + 0.7574 75.74%
CYP2C9 substrate - 0.8060 80.60%
CYP2D6 substrate - 0.8129 81.29%
CYP3A4 inhibition - 0.9451 94.51%
CYP2C9 inhibition - 0.9000 90.00%
CYP2C19 inhibition - 0.9020 90.20%
CYP2D6 inhibition - 0.9286 92.86%
CYP1A2 inhibition - 0.8869 88.69%
CYP2C8 inhibition + 0.7697 76.97%
CYP inhibitory promiscuity - 0.9512 95.12%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5237 52.37%
Eye corrosion - 0.9878 98.78%
Eye irritation - 0.9209 92.09%
Skin irritation + 0.4941 49.41%
Skin corrosion - 0.9346 93.46%
Ames mutagenesis - 0.6954 69.54%
Human Ether-a-go-go-Related Gene inhibition + 0.8127 81.27%
Micronuclear - 0.8600 86.00%
Hepatotoxicity - 0.6195 61.95%
skin sensitisation - 0.8895 88.95%
Respiratory toxicity + 0.7556 75.56%
Reproductive toxicity + 0.9000 90.00%
Mitochondrial toxicity + 0.6375 63.75%
Nephrotoxicity - 0.8293 82.93%
Acute Oral Toxicity (c) I 0.4479 44.79%
Estrogen receptor binding + 0.7404 74.04%
Androgen receptor binding + 0.7351 73.51%
Thyroid receptor binding - 0.5735 57.35%
Glucocorticoid receptor binding - 0.4648 46.48%
Aromatase binding + 0.6855 68.55%
PPAR gamma + 0.6815 68.15%
Honey bee toxicity - 0.5575 55.75%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity + 0.5700 57.00%
Fish aquatic toxicity + 0.9746 97.46%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.59% 96.09%
CHEMBL226 P30542 Adenosine A1 receptor 97.29% 95.93%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.18% 91.11%
CHEMBL1994 P08235 Mineralocorticoid receptor 93.94% 100.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 93.68% 86.33%
CHEMBL253 P34972 Cannabinoid CB2 receptor 93.41% 97.25%
CHEMBL332 P03956 Matrix metalloproteinase-1 90.94% 94.50%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 90.60% 95.89%
CHEMBL3137262 O60341 LSD1/CoREST complex 89.73% 97.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 89.65% 89.00%
CHEMBL1871 P10275 Androgen Receptor 89.26% 96.43%
CHEMBL3401 O75469 Pregnane X receptor 84.55% 94.73%
CHEMBL221 P23219 Cyclooxygenase-1 84.37% 90.17%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 83.56% 94.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.43% 95.89%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 82.72% 92.88%
CHEMBL241 Q14432 Phosphodiesterase 3A 82.61% 92.94%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 82.04% 94.45%
CHEMBL1937 Q92769 Histone deacetylase 2 81.58% 94.75%
CHEMBL5028 O14672 ADAM10 80.20% 97.50%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Dracaena angustifolia
Dracaena draco
Ruscus colchicus

Cross-Links

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PubChem 10818777
NPASS NPC51154
ChEMBL CHEMBL502227
LOTUS LTS0072027
wikiData Q105385451