[(1R,2S,3S,5S,6R,8S)-6-hydroxy-8-methyl-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-9,10-dioxatetracyclo[4.3.1.02,5.03,8]decan-2-yl]methyl 4-hydroxybenzoate

Details

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Internal ID b8cca58a-6363-4cd5-a622-b7fb00418e02
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name [(1R,2S,3S,5S,6R,8S)-6-hydroxy-8-methyl-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-9,10-dioxatetracyclo[4.3.1.02,5.03,8]decan-2-yl]methyl 4-hydroxybenzoate
SMILES (Canonical) CC12CC3(C4CC1(C4(C(O2)O3)COC(=O)C5=CC=C(C=C5)O)OC6C(C(C(C(O6)CO)O)O)O)O
SMILES (Isomeric) C[C@]12C[C@@]3([C@H]4C[C@@]1([C@@]4([C@H](O2)O3)COC(=O)C5=CC=C(C=C5)O)O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO)O)O)O)O
InChI InChI=1S/C23H28O12/c1-20-8-22(30)13-6-23(20,33-18-16(28)15(27)14(26)12(7-24)32-18)21(13,19(34-20)35-22)9-31-17(29)10-2-4-11(25)5-3-10/h2-5,12-16,18-19,24-28,30H,6-9H2,1H3/t12-,13+,14-,15+,16-,18+,19-,20+,21+,22-,23-/m1/s1
InChI Key FCHVXNVDFYXLIL-QYDSDWLYSA-N
Popularity 4 references in papers

Physical and Chemical Properties

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Molecular Formula C23H28O12
Molecular Weight 496.50 g/mol
Exact Mass 496.15807632 g/mol
Topological Polar Surface Area (TPSA) 185.00 Ų
XlogP -1.40
Atomic LogP (AlogP) -1.65
H-Bond Acceptor 12
H-Bond Donor 6
Rotatable Bonds 6

Synonyms

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BDBM50378696

2D Structure

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2D Structure of [(1R,2S,3S,5S,6R,8S)-6-hydroxy-8-methyl-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-9,10-dioxatetracyclo[4.3.1.02,5.03,8]decan-2-yl]methyl 4-hydroxybenzoate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7619 76.19%
Caco-2 - 0.8388 83.88%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.8714 87.14%
Subcellular localzation Mitochondria 0.6010 60.10%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9103 91.03%
OATP1B3 inhibitior + 0.9495 94.95%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.7750 77.50%
BSEP inhibitior - 0.6183 61.83%
P-glycoprotein inhibitior - 0.6448 64.48%
P-glycoprotein substrate - 0.6858 68.58%
CYP3A4 substrate + 0.6882 68.82%
CYP2C9 substrate - 0.7961 79.61%
CYP2D6 substrate - 0.8508 85.08%
CYP3A4 inhibition - 0.7967 79.67%
CYP2C9 inhibition - 0.8969 89.69%
CYP2C19 inhibition - 0.7749 77.49%
CYP2D6 inhibition - 0.9189 91.89%
CYP1A2 inhibition - 0.8600 86.00%
CYP2C8 inhibition + 0.7015 70.15%
CYP inhibitory promiscuity - 0.9292 92.92%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5461 54.61%
Eye corrosion - 0.9911 99.11%
Eye irritation - 0.9425 94.25%
Skin irritation - 0.7388 73.88%
Skin corrosion - 0.9421 94.21%
Ames mutagenesis - 0.6100 61.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5772 57.72%
Micronuclear - 0.7100 71.00%
Hepatotoxicity - 0.7822 78.22%
skin sensitisation - 0.8800 88.00%
Respiratory toxicity + 0.6000 60.00%
Reproductive toxicity + 0.8333 83.33%
Mitochondrial toxicity + 0.6125 61.25%
Nephrotoxicity - 0.7817 78.17%
Acute Oral Toxicity (c) III 0.3800 38.00%
Estrogen receptor binding + 0.7991 79.91%
Androgen receptor binding + 0.7541 75.41%
Thyroid receptor binding + 0.6003 60.03%
Glucocorticoid receptor binding + 0.6106 61.06%
Aromatase binding + 0.7917 79.17%
PPAR gamma + 0.7354 73.54%
Honey bee toxicity - 0.7952 79.52%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.5950 59.50%
Fish aquatic toxicity + 0.9577 95.77%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.78% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.88% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.67% 97.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 91.82% 86.33%
CHEMBL226 P30542 Adenosine A1 receptor 89.93% 95.93%
CHEMBL1994 P08235 Mineralocorticoid receptor 86.11% 100.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 85.62% 95.89%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 85.44% 95.83%
CHEMBL3060 Q9Y345 Glycine transporter 2 85.39% 99.17%
CHEMBL5852 Q96P65 Pyroglutamylated RFamide peptide receptor 84.55% 85.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 82.97% 89.00%
CHEMBL3401 O75469 Pregnane X receptor 82.66% 94.73%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 82.17% 95.89%
CHEMBL4208 P20618 Proteasome component C5 82.06% 90.00%
CHEMBL2107 P61073 C-X-C chemokine receptor type 4 81.18% 93.10%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 80.93% 94.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Paeonia anomala subsp. veitchii
Paeonia suffruticosa
Zanthoxylum nitidum

Cross-Links

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PubChem 46882883
NPASS NPC293568
LOTUS LTS0117133
wikiData Q104993160