(2S)-2-[(2R)-3,5-dihydroxy-2-[[(1S,4S,5R,8R,9R,13S,14R,17S,18R)-2-hydroxy-9-(hydroxymethyl)-4,5,9,13,20,20-hexamethyl-24-oxahexacyclo[15.5.2.01,18.04,17.05,14.08,13]tetracos-15-en-10-yl]oxy]-6-methyloxan-4-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

Details

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Internal ID 330df68c-078c-48fd-869d-af37bc5a347e
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name (2S)-2-[(2R)-3,5-dihydroxy-2-[[(1S,4S,5R,8R,9R,13S,14R,17S,18R)-2-hydroxy-9-(hydroxymethyl)-4,5,9,13,20,20-hexamethyl-24-oxahexacyclo[15.5.2.01,18.04,17.05,14.08,13]tetracos-15-en-10-yl]oxy]-6-methyloxan-4-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical) CC1C(C(C(C(O1)OC2CCC3(C(C2(C)CO)CCC4(C3C=CC56C4(CC(C7(C5CC(CC7)(C)C)CO6)O)C)C)C)O)OC8C(C(C(C(O8)CO)O)O)O)O
SMILES (Isomeric) CC1C(C(C([C@@H](O1)OC2CC[C@]3([C@H]([C@]2(C)CO)CC[C@@]4([C@@H]3C=C[C@@]56[C@]4(CC([C@@]7([C@H]5CC(CC7)(C)C)CO6)O)C)C)C)O)O[C@H]8C(C(C(C(O8)CO)O)O)O)O
InChI InChI=1S/C42H68O13/c1-21-28(46)33(55-34-31(49)30(48)29(47)22(18-43)53-34)32(50)35(52-21)54-27-10-11-37(4)23(38(27,5)19-44)8-12-39(6)24(37)9-13-42-25-16-36(2,3)14-15-41(25,20-51-42)26(45)17-40(39,42)7/h9,13,21-35,43-50H,8,10-12,14-20H2,1-7H3/t21?,22?,23-,24-,25-,26?,27?,28?,29?,30?,31?,32?,33?,34+,35+,37+,38+,39-,40+,41-,42+/m1/s1
InChI Key KYWSCMDFVARMPN-RPLIYQGKSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C42H68O13
Molecular Weight 781.00 g/mol
Exact Mass 780.46599222 g/mol
Topological Polar Surface Area (TPSA) 208.00 Ų
XlogP 2.50
Atomic LogP (AlogP) 1.78
H-Bond Acceptor 13
H-Bond Donor 8
Rotatable Bonds 6

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2S)-2-[(2R)-3,5-dihydroxy-2-[[(1S,4S,5R,8R,9R,13S,14R,17S,18R)-2-hydroxy-9-(hydroxymethyl)-4,5,9,13,20,20-hexamethyl-24-oxahexacyclo[15.5.2.01,18.04,17.05,14.08,13]tetracos-15-en-10-yl]oxy]-6-methyloxan-4-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6441 64.41%
Caco-2 - 0.8751 87.51%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.6663 66.63%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8382 83.82%
OATP1B3 inhibitior + 0.9158 91.58%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.5000 50.00%
BSEP inhibitior - 0.6101 61.01%
P-glycoprotein inhibitior + 0.7523 75.23%
P-glycoprotein substrate + 0.5000 50.00%
CYP3A4 substrate + 0.7234 72.34%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8287 82.87%
CYP3A4 inhibition - 0.9390 93.90%
CYP2C9 inhibition - 0.8634 86.34%
CYP2C19 inhibition - 0.8659 86.59%
CYP2D6 inhibition - 0.9457 94.57%
CYP1A2 inhibition - 0.9115 91.15%
CYP2C8 inhibition + 0.6838 68.38%
CYP inhibitory promiscuity - 0.9473 94.73%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6210 62.10%
Eye corrosion - 0.9900 99.00%
Eye irritation - 0.9095 90.95%
Skin irritation - 0.6612 66.12%
Skin corrosion - 0.9452 94.52%
Ames mutagenesis - 0.6770 67.70%
Human Ether-a-go-go-Related Gene inhibition + 0.7524 75.24%
Micronuclear - 0.8900 89.00%
Hepatotoxicity - 0.5439 54.39%
skin sensitisation - 0.9108 91.08%
Respiratory toxicity - 0.5000 50.00%
Reproductive toxicity + 0.6889 68.89%
Mitochondrial toxicity - 0.5875 58.75%
Nephrotoxicity - 0.7051 70.51%
Acute Oral Toxicity (c) I 0.7129 71.29%
Estrogen receptor binding + 0.7036 70.36%
Androgen receptor binding + 0.7560 75.60%
Thyroid receptor binding - 0.5770 57.70%
Glucocorticoid receptor binding + 0.6256 62.56%
Aromatase binding + 0.6571 65.71%
PPAR gamma + 0.7266 72.66%
Honey bee toxicity - 0.6629 66.29%
Biodegradation - 0.6500 65.00%
Crustacea aquatic toxicity - 0.5400 54.00%
Fish aquatic toxicity + 0.9152 91.52%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.46% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.24% 96.09%
CHEMBL3714130 P46095 G-protein coupled receptor 6 94.69% 97.36%
CHEMBL226 P30542 Adenosine A1 receptor 94.16% 95.93%
CHEMBL3137262 O60341 LSD1/CoREST complex 91.99% 97.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.95% 94.45%
CHEMBL1293249 Q13887 Kruppel-like factor 5 91.02% 86.33%
CHEMBL5608 Q16288 NT-3 growth factor receptor 90.33% 95.89%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 87.82% 95.50%
CHEMBL1994 P08235 Mineralocorticoid receptor 87.29% 100.00%
CHEMBL4005 P42336 PI3-kinase p110-alpha subunit 86.68% 97.47%
CHEMBL241 Q14432 Phosphodiesterase 3A 86.36% 92.94%
CHEMBL2243 O00519 Anandamide amidohydrolase 85.24% 97.53%
CHEMBL1806 P11388 DNA topoisomerase II alpha 85.09% 89.00%
CHEMBL2842 P42345 Serine/threonine-protein kinase mTOR 84.56% 92.78%
CHEMBL4618 P09960 Leukotriene A4 hydrolase 82.71% 97.86%
CHEMBL1907601 P11802 Cyclin-dependent kinase 4/cyclin D1 82.26% 98.99%
CHEMBL2581 P07339 Cathepsin D 81.00% 98.95%
CHEMBL1914 P06276 Butyrylcholinesterase 80.69% 95.00%
CHEMBL4227 P25090 Lipoxin A4 receptor 80.37% 100.00%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 80.13% 93.04%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 80.00% 94.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Buddleja japonica
Bupleurum chinense
Bupleurum falcatum
Bupleurum kaoi
Bupleurum kunmingense
Bupleurum polyclonum
Bupleurum rockii
Clinopodium chinense
Clinopodium gracile
Clinopodium micranthum
Scrophularia kakudensis
Verbascum sinaiticum

Cross-Links

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PubChem 138114182
LOTUS LTS0238261
wikiData Q104246825