[(2R,3R,4S,5S)-4-hydroxy-5-(hydroxymethyl)-2-[[(2R,3S,4S,5R,6S)-3,4,5-trihydroxy-6-[2-[(1R)-4-methylcyclohex-3-en-1-yl]propan-2-yloxy]oxan-2-yl]methoxy]oxolan-3-yl] 3,4,5-trihydroxybenzoate

Details

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Internal ID aca61759-1939-498f-87d5-1cccfafd5e78
Taxonomy Benzenoids > Benzene and substituted derivatives > Benzoic acids and derivatives > Hydroxybenzoic acid derivatives > Gallic acid and derivatives > Galloyl esters
IUPAC Name [(2R,3R,4S,5S)-4-hydroxy-5-(hydroxymethyl)-2-[[(2R,3S,4S,5R,6S)-3,4,5-trihydroxy-6-[2-[(1R)-4-methylcyclohex-3-en-1-yl]propan-2-yloxy]oxan-2-yl]methoxy]oxolan-3-yl] 3,4,5-trihydroxybenzoate
SMILES (Canonical) CC1=CCC(CC1)C(C)(C)OC2C(C(C(C(O2)COC3C(C(C(O3)CO)O)OC(=O)C4=CC(=C(C(=C4)O)O)O)O)O)O
SMILES (Isomeric) CC1=CC[C@@H](CC1)C(C)(C)O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO[C@H]3[C@@H]([C@H]([C@@H](O3)CO)O)OC(=O)C4=CC(=C(C(=C4)O)O)O)O)O)O
InChI InChI=1S/C28H40O14/c1-12-4-6-14(7-5-12)28(2,3)42-26-23(36)22(35)20(33)18(40-26)11-38-27-24(21(34)17(10-29)39-27)41-25(37)13-8-15(30)19(32)16(31)9-13/h4,8-9,14,17-18,20-24,26-27,29-36H,5-7,10-11H2,1-3H3/t14-,17-,18+,20+,21-,22-,23+,24+,26-,27+/m0/s1
InChI Key ZPXRVNRKZYBYHR-CRIMJPFASA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C28H40O14
Molecular Weight 600.60 g/mol
Exact Mass 600.24180595 g/mol
Topological Polar Surface Area (TPSA) 225.00 Ų
XlogP -0.10
Atomic LogP (AlogP) -0.23
H-Bond Acceptor 14
H-Bond Donor 8
Rotatable Bonds 9

Synonyms

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(4R)-8-[6-O-(2-O-Galloyl-alpha-L-arabinofuranosyl)-beta-D-glucopyranosyloxy]-p-mentha-1-ene

2D Structure

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2D Structure of [(2R,3R,4S,5S)-4-hydroxy-5-(hydroxymethyl)-2-[[(2R,3S,4S,5R,6S)-3,4,5-trihydroxy-6-[2-[(1R)-4-methylcyclohex-3-en-1-yl]propan-2-yloxy]oxan-2-yl]methoxy]oxolan-3-yl] 3,4,5-trihydroxybenzoate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7718 77.18%
Caco-2 - 0.8768 87.68%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.8821 88.21%
OATP2B1 inhibitior - 0.8626 86.26%
OATP1B1 inhibitior + 0.7673 76.73%
OATP1B3 inhibitior + 0.8300 83.00%
MATE1 inhibitior - 0.8400 84.00%
OCT2 inhibitior - 0.7250 72.50%
BSEP inhibitior - 0.5800 58.00%
P-glycoprotein inhibitior - 0.4923 49.23%
P-glycoprotein substrate - 0.6491 64.91%
CYP3A4 substrate + 0.6677 66.77%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8595 85.95%
CYP3A4 inhibition - 0.7962 79.62%
CYP2C9 inhibition - 0.7090 70.90%
CYP2C19 inhibition - 0.7515 75.15%
CYP2D6 inhibition - 0.8868 88.68%
CYP1A2 inhibition - 0.6915 69.15%
CYP2C8 inhibition + 0.7251 72.51%
CYP inhibitory promiscuity - 0.7246 72.46%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9400 94.00%
Carcinogenicity (trinary) Non-required 0.6239 62.39%
Eye corrosion - 0.9905 99.05%
Eye irritation - 0.9286 92.86%
Skin irritation - 0.7321 73.21%
Skin corrosion - 0.9499 94.99%
Ames mutagenesis - 0.7300 73.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6616 66.16%
Micronuclear - 0.8100 81.00%
Hepatotoxicity - 0.6125 61.25%
skin sensitisation - 0.8617 86.17%
Respiratory toxicity - 0.5556 55.56%
Reproductive toxicity + 0.7778 77.78%
Mitochondrial toxicity - 0.5125 51.25%
Nephrotoxicity - 0.8949 89.49%
Acute Oral Toxicity (c) III 0.4993 49.93%
Estrogen receptor binding + 0.7232 72.32%
Androgen receptor binding + 0.6067 60.67%
Thyroid receptor binding - 0.5000 50.00%
Glucocorticoid receptor binding + 0.5792 57.92%
Aromatase binding + 0.6678 66.78%
PPAR gamma + 0.6813 68.13%
Honey bee toxicity - 0.8399 83.99%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.5900 59.00%
Fish aquatic toxicity + 0.9913 99.13%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.41% 91.11%
CHEMBL2581 P07339 Cathepsin D 94.67% 98.95%
CHEMBL3401 O75469 Pregnane X receptor 93.97% 94.73%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.96% 96.09%
CHEMBL5255 O00206 Toll-like receptor 4 92.28% 92.50%
CHEMBL1293249 Q13887 Kruppel-like factor 5 91.76% 86.33%
CHEMBL3137262 O60341 LSD1/CoREST complex 91.52% 97.09%
CHEMBL3060 Q9Y345 Glycine transporter 2 91.35% 99.17%
CHEMBL253 P34972 Cannabinoid CB2 receptor 91.02% 97.25%
CHEMBL1806 P11388 DNA topoisomerase II alpha 89.49% 89.00%
CHEMBL4581 P52732 Kinesin-like protein 1 88.04% 93.18%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 86.13% 89.34%
CHEMBL5608 Q16288 NT-3 growth factor receptor 85.81% 95.89%
CHEMBL335 P18031 Protein-tyrosine phosphatase 1B 85.37% 95.17%
CHEMBL1994 P08235 Mineralocorticoid receptor 85.14% 100.00%
CHEMBL3475 P05121 Plasminogen activator inhibitor-1 84.74% 83.00%
CHEMBL2085 P14174 Macrophage migration inhibitory factor 84.01% 80.78%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 83.61% 96.95%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 83.49% 95.89%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 82.72% 95.56%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 82.62% 94.00%
CHEMBL4657 Q6V1X1 Dipeptidyl peptidase VIII 82.54% 97.21%
CHEMBL2345 P51812 Ribosomal protein S6 kinase alpha 3 82.03% 95.64%
CHEMBL1873 P00750 Tissue-type plasminogen activator 81.87% 93.33%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 81.52% 96.00%
CHEMBL3714130 P46095 G-protein coupled receptor 6 81.04% 97.36%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 80.99% 94.33%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 80.40% 98.75%
CHEMBL3194 P02766 Transthyretin 80.12% 90.71%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Artemisia afra
Epipactis palustris
Pimenta dioica
Rumex obtusifolius

Cross-Links

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PubChem 24879406
NPASS NPC4747
ChEMBL CHEMBL500762
LOTUS LTS0218973
wikiData Q105381296