(2S,3S,4R,5R,6S)-2-(hydroxymethyl)-6-[2-(hydroxymethyl)phenoxy]oxane-3,4,5-triol

Details

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Internal ID c946ea13-a673-49e5-b0d8-bfa0167923d5
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > Phenolic glycosides
IUPAC Name (2S,3S,4R,5R,6S)-2-(hydroxymethyl)-6-[2-(hydroxymethyl)phenoxy]oxane-3,4,5-triol
SMILES (Canonical) C1=CC=C(C(=C1)CO)OC2C(C(C(C(O2)CO)O)O)O
SMILES (Isomeric) C1=CC=C(C(=C1)CO)O[C@H]2[C@@H]([C@@H]([C@@H]([C@@H](O2)CO)O)O)O
InChI InChI=1S/C13H18O7/c14-5-7-3-1-2-4-8(7)19-13-12(18)11(17)10(16)9(6-15)20-13/h1-4,9-18H,5-6H2/t9-,10+,11+,12+,13+/m0/s1
InChI Key NGFMICBWJRZIBI-ZOLYEBIHSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C13H18O7
Molecular Weight 286.28 g/mol
Exact Mass 286.10525291 g/mol
Topological Polar Surface Area (TPSA) 120.00 Ų
XlogP -1.20
Atomic LogP (AlogP) -1.64
H-Bond Acceptor 7
H-Bond Donor 5
Rotatable Bonds 4

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2S,3S,4R,5R,6S)-2-(hydroxymethyl)-6-[2-(hydroxymethyl)phenoxy]oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.8479 84.79%
Caco-2 - 0.8059 80.59%
Blood Brain Barrier + 0.6500 65.00%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.6134 61.34%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9413 94.13%
OATP1B3 inhibitior + 0.9402 94.02%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 0.8250 82.50%
BSEP inhibitior - 0.9778 97.78%
P-glycoprotein inhibitior - 0.9474 94.74%
P-glycoprotein substrate - 0.9700 97.00%
CYP3A4 substrate - 0.5378 53.78%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8134 81.34%
CYP3A4 inhibition - 0.9171 91.71%
CYP2C9 inhibition - 0.8562 85.62%
CYP2C19 inhibition - 0.8671 86.71%
CYP2D6 inhibition - 0.9206 92.06%
CYP1A2 inhibition - 0.9288 92.88%
CYP2C8 inhibition - 0.7987 79.87%
CYP inhibitory promiscuity - 0.6802 68.02%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.6366 63.66%
Eye corrosion - 0.9925 99.25%
Eye irritation - 0.9516 95.16%
Skin irritation - 0.8355 83.55%
Skin corrosion - 0.9678 96.78%
Ames mutagenesis - 0.6400 64.00%
Human Ether-a-go-go-Related Gene inhibition - 0.7128 71.28%
Micronuclear - 0.6082 60.82%
Hepatotoxicity - 0.8424 84.24%
skin sensitisation - 0.8164 81.64%
Respiratory toxicity - 0.5667 56.67%
Reproductive toxicity - 0.5444 54.44%
Mitochondrial toxicity - 0.7875 78.75%
Nephrotoxicity - 0.5560 55.60%
Acute Oral Toxicity (c) III 0.6179 61.79%
Estrogen receptor binding - 0.8205 82.05%
Androgen receptor binding - 0.7402 74.02%
Thyroid receptor binding - 0.5513 55.13%
Glucocorticoid receptor binding - 0.7625 76.25%
Aromatase binding - 0.7294 72.94%
PPAR gamma + 0.5713 57.13%
Honey bee toxicity - 0.7581 75.81%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.5900 59.00%
Fish aquatic toxicity - 0.5000 50.00%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL1075138 Q9NUW8 Tyrosyl-DNA phosphodiesterase 1 446.7 nM
Potency
via Super-PRED

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.26% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.53% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 85.74% 95.56%
CHEMBL216 P11229 Muscarinic acetylcholine receptor M1 85.00% 94.23%
CHEMBL3401 O75469 Pregnane X receptor 83.12% 94.73%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 82.87% 96.00%
CHEMBL2581 P07339 Cathepsin D 82.28% 98.95%
CHEMBL226 P30542 Adenosine A1 receptor 82.24% 95.93%
CHEMBL3137262 O60341 LSD1/CoREST complex 81.92% 97.09%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 81.67% 92.62%
CHEMBL1293249 Q13887 Kruppel-like factor 5 80.76% 86.33%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 80.67% 94.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Magnolia coco
Magnolia liliiflora
Magnolia officinalis
Paeonia anomala subsp. veitchii
Populus suaveolens
Populus tomentosa
Salix babylonica
Tamarix chinensis

Cross-Links

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PubChem 6931410
NPASS NPC261084