(2R,3R,4R,5R)-2-(3-Hydroxy-4-methoxyphenyl)-5-(hydroxymethyl)pyrrolidine-3,4-diol

Details

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Internal ID 0aad1444-5631-47e1-98ae-e54712325e14
Taxonomy Organoheterocyclic compounds > Pyrrolidines > Phenylpyrrolidines
IUPAC Name (2R,3R,4R,5R)-2-(3-hydroxy-4-methoxyphenyl)-5-(hydroxymethyl)pyrrolidine-3,4-diol
SMILES (Canonical) COC1=C(C=C(C=C1)C2C(C(C(N2)CO)O)O)O
SMILES (Isomeric) COC1=C(C=C(C=C1)[C@@H]2[C@H]([C@@H]([C@H](N2)CO)O)O)O
InChI InChI=1S/C12H17NO5/c1-18-9-3-2-6(4-8(9)15)10-12(17)11(16)7(5-14)13-10/h2-4,7,10-17H,5H2,1H3/t7-,10-,11-,12-/m1/s1
InChI Key NEAQPVOYHYPSER-FAQVLOEFSA-N
Popularity 4 references in papers

Physical and Chemical Properties

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Molecular Formula C12H17NO5
Molecular Weight 255.27 g/mol
Exact Mass 255.11067264 g/mol
Topological Polar Surface Area (TPSA) 102.00 Ų
XlogP -0.60
Atomic LogP (AlogP) -0.87
H-Bond Acceptor 6
H-Bond Donor 5
Rotatable Bonds 3

Synonyms

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92A462B3-F761-4E25-9BBA-03E3F343B997
(2R)-3beta,4alpha-Dihydroxy-5beta-(3-hydroxy-4-methoxyphenyl)pyrrolidine-2alpha-methanol
(2R,3R,4R,5R)-2-(3-Hydroxy-4-methoxyphenyl)-5-(hydroxymethyl)pyrrolidine-3,4-diol

2D Structure

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2D Structure of (2R,3R,4R,5R)-2-(3-Hydroxy-4-methoxyphenyl)-5-(hydroxymethyl)pyrrolidine-3,4-diol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9258 92.58%
Caco-2 - 0.7073 70.73%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability + 0.5286 52.86%
Subcellular localzation Mitochondria 0.5467 54.67%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9286 92.86%
OATP1B3 inhibitior + 0.9523 95.23%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior - 0.9363 93.63%
P-glycoprotein inhibitior - 0.9771 97.71%
P-glycoprotein substrate - 0.7154 71.54%
CYP3A4 substrate - 0.5384 53.84%
CYP2C9 substrate - 0.8153 81.53%
CYP2D6 substrate + 0.4867 48.67%
CYP3A4 inhibition - 0.8908 89.08%
CYP2C9 inhibition - 0.8371 83.71%
CYP2C19 inhibition - 0.8786 87.86%
CYP2D6 inhibition - 0.7007 70.07%
CYP1A2 inhibition - 0.6830 68.30%
CYP2C8 inhibition + 0.5565 55.65%
CYP inhibitory promiscuity - 0.6873 68.73%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9200 92.00%
Carcinogenicity (trinary) Non-required 0.7055 70.55%
Eye corrosion - 0.9897 98.97%
Eye irritation - 0.9432 94.32%
Skin irritation - 0.7674 76.74%
Skin corrosion - 0.8980 89.80%
Ames mutagenesis - 0.6100 61.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6774 67.74%
Micronuclear + 0.7274 72.74%
Hepatotoxicity - 0.7085 70.85%
skin sensitisation - 0.8072 80.72%
Respiratory toxicity - 0.5444 54.44%
Reproductive toxicity + 0.8778 87.78%
Mitochondrial toxicity + 0.8250 82.50%
Nephrotoxicity - 0.7038 70.38%
Acute Oral Toxicity (c) III 0.7108 71.08%
Estrogen receptor binding - 0.6720 67.20%
Androgen receptor binding - 0.6774 67.74%
Thyroid receptor binding - 0.5455 54.55%
Glucocorticoid receptor binding - 0.5880 58.80%
Aromatase binding - 0.6110 61.10%
PPAR gamma - 0.5120 51.20%
Honey bee toxicity - 0.9405 94.05%
Biodegradation - 0.6750 67.50%
Crustacea aquatic toxicity - 0.5749 57.49%
Fish aquatic toxicity - 0.9004 90.04%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.72% 96.09%
CHEMBL1951 P21397 Monoamine oxidase A 95.34% 91.49%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.24% 97.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 90.84% 91.11%
CHEMBL2581 P07339 Cathepsin D 89.10% 98.95%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 88.96% 94.45%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 88.67% 94.00%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 86.16% 86.92%
CHEMBL5608 Q16288 NT-3 growth factor receptor 85.02% 95.89%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 84.67% 95.56%
CHEMBL2535 P11166 Glucose transporter 83.05% 98.75%
CHEMBL3194 P02766 Transthyretin 82.99% 90.71%
CHEMBL249 P25103 Neurokinin 1 receptor 82.35% 99.17%
CHEMBL3192 Q9BY41 Histone deacetylase 8 82.14% 93.99%
CHEMBL1293249 Q13887 Kruppel-like factor 5 80.33% 86.33%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Codonopsis clematidea
Lobelia chinensis

Cross-Links

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PubChem 44569922
NPASS NPC37205
ChEMBL CHEMBL468063
LOTUS LTS0224205
wikiData Q105177807