2,3-Dihydrowithaferin A

Details

Top
Internal ID 248c6f31-6d18-4883-b371-b83e49d6a8a1
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroid lactones > Withanolides and derivatives
IUPAC Name (1S,2R,6S,7R,9R,11S,12S,15R,16S)-6-hydroxy-15-[(1S)-1-[(2R)-5-(hydroxymethyl)-4-methyl-6-oxo-2,3-dihydropyran-2-yl]ethyl]-2,16-dimethyl-8-oxapentacyclo[9.7.0.02,7.07,9.012,16]octadecan-3-one
SMILES (Canonical) CC1=C(C(=O)OC(C1)C(C)C2CCC3C2(CCC4C3CC5C6(C4(C(=O)CCC6O)C)O5)C)CO
SMILES (Isomeric) CC1=C(C(=O)O[C@H](C1)[C@@H](C)[C@H]2CC[C@@H]3[C@@]2(CC[C@H]4[C@H]3C[C@@H]5[C@]6([C@@]4(C(=O)CC[C@@H]6O)C)O5)C)CO
InChI InChI=1S/C28H40O6/c1-14-11-21(33-25(32)17(14)13-29)15(2)18-5-6-19-16-12-24-28(34-24)23(31)8-7-22(30)27(28,4)20(16)9-10-26(18,19)3/h15-16,18-21,23-24,29,31H,5-13H2,1-4H3/t15-,16-,18+,19-,20-,21+,23-,24+,26+,27-,28+/m0/s1
InChI Key YRXCLNDPESBJHL-CKNDUULBSA-N
Popularity 5 references in papers

Physical and Chemical Properties

Top
Molecular Formula C28H40O6
Molecular Weight 472.60 g/mol
Exact Mass 472.28248899 g/mol
Topological Polar Surface Area (TPSA) 96.40 Ų
XlogP 3.80
Atomic LogP (AlogP) 3.58
H-Bond Acceptor 6
H-Bond Donor 2
Rotatable Bonds 3

Synonyms

Top
2,3-Dihydrowithaferin A
CHEBI:69124
2,3-Dihydro-Withaferin A
CHEMBL1934585
SCHEMBL21164151
HY-N5120
AKOS040760371
MS-28752
CS-0032441
E88629
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

Top
2D Structure of 2,3-Dihydrowithaferin A

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9375 93.75%
Caco-2 - 0.6565 65.65%
Blood Brain Barrier + 0.6500 65.00%
Human oral bioavailability + 0.5429 54.29%
Subcellular localzation Mitochondria 0.7446 74.46%
OATP2B1 inhibitior - 0.5627 56.27%
OATP1B1 inhibitior + 0.8548 85.48%
OATP1B3 inhibitior + 0.9469 94.69%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.5796 57.96%
BSEP inhibitior + 0.8070 80.70%
P-glycoprotein inhibitior - 0.4614 46.14%
P-glycoprotein substrate + 0.5395 53.95%
CYP3A4 substrate + 0.7292 72.92%
CYP2C9 substrate - 0.8299 82.99%
CYP2D6 substrate - 0.8908 89.08%
CYP3A4 inhibition - 0.6949 69.49%
CYP2C9 inhibition - 0.8257 82.57%
CYP2C19 inhibition - 0.9233 92.33%
CYP2D6 inhibition - 0.9540 95.40%
CYP1A2 inhibition - 0.8616 86.16%
CYP2C8 inhibition + 0.4643 46.43%
CYP inhibitory promiscuity - 0.9602 96.02%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.5686 56.86%
Eye corrosion - 0.9906 99.06%
Eye irritation - 0.9510 95.10%
Skin irritation + 0.5650 56.50%
Skin corrosion - 0.9359 93.59%
Ames mutagenesis - 0.5602 56.02%
Human Ether-a-go-go-Related Gene inhibition - 0.4663 46.63%
Micronuclear - 0.7300 73.00%
Hepatotoxicity + 0.5530 55.30%
skin sensitisation - 0.8981 89.81%
Respiratory toxicity + 0.8556 85.56%
Reproductive toxicity + 0.9222 92.22%
Mitochondrial toxicity + 0.7875 78.75%
Nephrotoxicity - 0.5756 57.56%
Acute Oral Toxicity (c) I 0.5711 57.11%
Estrogen receptor binding + 0.7475 74.75%
Androgen receptor binding + 0.7821 78.21%
Thyroid receptor binding + 0.5159 51.59%
Glucocorticoid receptor binding + 0.8024 80.24%
Aromatase binding + 0.7373 73.73%
PPAR gamma + 0.6026 60.26%
Honey bee toxicity - 0.7790 77.90%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.5800 58.00%
Fish aquatic toxicity + 0.9586 95.86%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL204 P00734 Thrombin 93.17% 96.01%
CHEMBL2581 P07339 Cathepsin D 92.42% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.33% 95.56%
CHEMBL3137262 O60341 LSD1/CoREST complex 91.94% 97.09%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.34% 96.09%
CHEMBL3837 P07711 Cathepsin L 91.24% 96.61%
CHEMBL2996 Q05655 Protein kinase C delta 89.75% 97.79%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 89.51% 99.23%
CHEMBL5103 Q969S8 Histone deacetylase 10 89.24% 90.08%
CHEMBL1994 P08235 Mineralocorticoid receptor 88.78% 100.00%
CHEMBL253 P34972 Cannabinoid CB2 receptor 88.32% 97.25%
CHEMBL1937 Q92769 Histone deacetylase 2 88.05% 94.75%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 87.99% 93.04%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 86.55% 95.89%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 85.77% 91.11%
CHEMBL299 P17252 Protein kinase C alpha 85.37% 98.03%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 84.31% 82.69%
CHEMBL3310 Q96DB2 Histone deacetylase 11 83.04% 88.56%
CHEMBL4072 P07858 Cathepsin B 82.97% 93.67%
CHEMBL1293249 Q13887 Kruppel-like factor 5 82.33% 86.33%
CHEMBL3359 P21462 Formyl peptide receptor 1 82.28% 93.56%
CHEMBL5028 O14672 ADAM10 81.23% 97.50%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 81.08% 93.03%
CHEMBL1871 P10275 Androgen Receptor 80.83% 96.43%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 80.30% 90.71%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Physalis longifolia
Vassobia breviflora
Withania aristata
Withania somnifera

Cross-Links

Top
PubChem 15411208
NPASS NPC284915
ChEMBL CHEMBL1934585
LOTUS LTS0207519
wikiData Q27137464