1,3,5-Trihydroxy-2-prenyl-9H-xanthene-9-one

Details

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Internal ID 1e0b3fb2-2e90-408d-8607-ff2715e1d6f4
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Xanthones > 2-prenylated xanthones
IUPAC Name 1,3,5-trihydroxy-2-(3-methylbut-2-enyl)xanthen-9-one
SMILES (Canonical) CC(=CCC1=C(C2=C(C=C1O)OC3=C(C2=O)C=CC=C3O)O)C
SMILES (Isomeric) CC(=CCC1=C(C2=C(C=C1O)OC3=C(C2=O)C=CC=C3O)O)C
InChI InChI=1S/C18H16O5/c1-9(2)6-7-10-13(20)8-14-15(16(10)21)17(22)11-4-3-5-12(19)18(11)23-14/h3-6,8,19-21H,7H2,1-2H3
InChI Key XEHWUYVZHDBZHK-UHFFFAOYSA-N
Popularity 12 references in papers

Physical and Chemical Properties

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Molecular Formula C18H16O5
Molecular Weight 312.30 g/mol
Exact Mass 312.09977361 g/mol
Topological Polar Surface Area (TPSA) 87.00 Ų
XlogP 4.40
Atomic LogP (AlogP) 3.57
H-Bond Acceptor 5
H-Bond Donor 3
Rotatable Bonds 2

Synonyms

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SCHEMBL24075570
1,3,5-Trihydroxy-2-prenyl-9H-xanthene-9-one
2-(3-methylbut-2-enyl)-1,3,5-trihydroxyxanthone

2D Structure

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2D Structure of 1,3,5-Trihydroxy-2-prenyl-9H-xanthene-9-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9841 98.41%
Caco-2 - 0.6903 69.03%
Blood Brain Barrier - 0.5879 58.79%
Human oral bioavailability + 0.6857 68.57%
Subcellular localzation Mitochondria 0.5524 55.24%
OATP2B1 inhibitior - 0.5451 54.51%
OATP1B1 inhibitior + 0.9282 92.82%
OATP1B3 inhibitior + 0.9593 95.93%
MATE1 inhibitior - 0.7400 74.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior + 0.6161 61.61%
P-glycoprotein inhibitior - 0.6466 64.66%
P-glycoprotein substrate - 0.7708 77.08%
CYP3A4 substrate + 0.5475 54.75%
CYP2C9 substrate - 0.5755 57.55%
CYP2D6 substrate - 0.8328 83.28%
CYP3A4 inhibition - 0.5868 58.68%
CYP2C9 inhibition + 0.9048 90.48%
CYP2C19 inhibition + 0.8543 85.43%
CYP2D6 inhibition + 0.5000 50.00%
CYP1A2 inhibition + 0.9048 90.48%
CYP2C8 inhibition - 0.6365 63.65%
CYP inhibitory promiscuity + 0.9028 90.28%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.7240 72.40%
Eye corrosion - 0.9884 98.84%
Eye irritation + 0.7849 78.49%
Skin irritation - 0.6712 67.12%
Skin corrosion - 0.9008 90.08%
Ames mutagenesis + 0.7100 71.00%
Human Ether-a-go-go-Related Gene inhibition - 0.6246 62.46%
Micronuclear + 0.5400 54.00%
Hepatotoxicity - 0.6072 60.72%
skin sensitisation - 0.6220 62.20%
Respiratory toxicity + 0.8000 80.00%
Reproductive toxicity + 0.8333 83.33%
Mitochondrial toxicity + 0.7000 70.00%
Nephrotoxicity - 0.9054 90.54%
Acute Oral Toxicity (c) III 0.6340 63.40%
Estrogen receptor binding + 0.9231 92.31%
Androgen receptor binding + 0.6663 66.63%
Thyroid receptor binding + 0.5304 53.04%
Glucocorticoid receptor binding + 0.8939 89.39%
Aromatase binding + 0.6725 67.25%
PPAR gamma + 0.9611 96.11%
Honey bee toxicity - 0.8917 89.17%
Biodegradation - 0.9000 90.00%
Crustacea aquatic toxicity - 0.5400 54.00%
Fish aquatic toxicity + 0.9902 99.02%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.31% 91.11%
CHEMBL2581 P07339 Cathepsin D 97.49% 98.95%
CHEMBL3401 O75469 Pregnane X receptor 96.86% 94.73%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 94.74% 95.56%
CHEMBL1806 P11388 DNA topoisomerase II alpha 94.67% 89.00%
CHEMBL1951 P21397 Monoamine oxidase A 93.47% 91.49%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 92.08% 94.45%
CHEMBL3192 Q9BY41 Histone deacetylase 8 91.78% 93.99%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.77% 86.33%
CHEMBL3830 Q2M2I8 Adaptor-associated kinase 88.26% 83.10%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 87.89% 99.23%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 86.86% 94.00%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 84.44% 85.14%
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 82.47% 83.57%
CHEMBL1937 Q92769 Histone deacetylase 2 80.33% 94.75%
CHEMBL3060 Q9Y345 Glycine transporter 2 80.04% 99.17%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Anaxagorea luzonensis
Calophyllum tomentosum
Crocus sieberi
Eugenia myrcianthes
Gynochthodes officinalis
Jacobaea persoonii
Montanoa karwinskii
Salix babylonica
Strychnos decussata
Verbena bonariensis

Cross-Links

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PubChem 9995643
NPASS NPC218701
LOTUS LTS0075785
wikiData Q105326355