(2R,3R,4S,5R,6R)-2-[(2E)-3,7-dimethylocta-2,6-dienoxy]-6-[[(2R,3R,4R,5R)-3,4,5-trihydroxyoxan-2-yl]oxymethyl]oxane-3,4,5-triol

Details

Top
Internal ID 3f0ceaae-eb11-49b2-9376-6a77040ed206
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name (2R,3R,4S,5R,6R)-2-[(2E)-3,7-dimethylocta-2,6-dienoxy]-6-[[(2R,3R,4R,5R)-3,4,5-trihydroxyoxan-2-yl]oxymethyl]oxane-3,4,5-triol
SMILES (Canonical) CC(=CCCC(=CCOC1C(C(C(C(O1)COC2C(C(C(CO2)O)O)O)O)O)O)C)C
SMILES (Isomeric) CC(=CCC/C(=C/CO[C@H]1[C@@H]([C@H]([C@H]([C@H](O1)CO[C@@H]2[C@@H]([C@@H]([C@@H](CO2)O)O)O)O)O)O)/C)C
InChI InChI=1S/C21H36O10/c1-11(2)5-4-6-12(3)7-8-28-21-19(27)17(25)16(24)14(31-21)10-30-20-18(26)15(23)13(22)9-29-20/h5,7,13-27H,4,6,8-10H2,1-3H3/b12-7+/t13-,14-,15-,16+,17+,18-,19-,20-,21-/m1/s1
InChI Key IEGFOTASSBZIBZ-BPONVKPOSA-N
Popularity 0 references in papers

Physical and Chemical Properties

Top
Molecular Formula C21H36O10
Molecular Weight 448.50 g/mol
Exact Mass 448.23084734 g/mol
Topological Polar Surface Area (TPSA) 158.00 Ų
XlogP -0.80
Atomic LogP (AlogP) -1.04
H-Bond Acceptor 10
H-Bond Donor 6
Rotatable Bonds 9

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of (2R,3R,4S,5R,6R)-2-[(2E)-3,7-dimethylocta-2,6-dienoxy]-6-[[(2R,3R,4R,5R)-3,4,5-trihydroxyoxan-2-yl]oxymethyl]oxane-3,4,5-triol

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5820 58.20%
Caco-2 - 0.8229 82.29%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.6714 67.14%
Subcellular localzation Mitochondria 0.8375 83.75%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9126 91.26%
OATP1B3 inhibitior + 0.8621 86.21%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.7000 70.00%
BSEP inhibitior - 0.6904 69.04%
P-glycoprotein inhibitior - 0.7819 78.19%
P-glycoprotein substrate - 0.8639 86.39%
CYP3A4 substrate + 0.5896 58.96%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8282 82.82%
CYP3A4 inhibition - 0.8861 88.61%
CYP2C9 inhibition - 0.8803 88.03%
CYP2C19 inhibition - 0.8189 81.89%
CYP2D6 inhibition - 0.9114 91.14%
CYP1A2 inhibition - 0.8831 88.31%
CYP2C8 inhibition - 0.8139 81.39%
CYP inhibitory promiscuity - 0.9498 94.98%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6961 69.61%
Eye corrosion - 0.9889 98.89%
Eye irritation - 0.9585 95.85%
Skin irritation - 0.7399 73.99%
Skin corrosion - 0.9589 95.89%
Ames mutagenesis + 0.6300 63.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7080 70.80%
Micronuclear - 0.8900 89.00%
Hepatotoxicity - 0.7966 79.66%
skin sensitisation - 0.8632 86.32%
Respiratory toxicity - 0.7111 71.11%
Reproductive toxicity + 0.5556 55.56%
Mitochondrial toxicity + 0.5125 51.25%
Nephrotoxicity - 0.8328 83.28%
Acute Oral Toxicity (c) III 0.6778 67.78%
Estrogen receptor binding + 0.5406 54.06%
Androgen receptor binding - 0.7364 73.64%
Thyroid receptor binding + 0.5243 52.43%
Glucocorticoid receptor binding - 0.5886 58.86%
Aromatase binding + 0.6710 67.10%
PPAR gamma + 0.6666 66.66%
Honey bee toxicity - 0.8022 80.22%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.6400 64.00%
Fish aquatic toxicity + 0.9403 94.03%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.70% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.34% 96.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 92.68% 97.25%
CHEMBL3401 O75469 Pregnane X receptor 90.47% 94.73%
CHEMBL2581 P07339 Cathepsin D 85.78% 98.95%
CHEMBL5957 P21589 5'-nucleotidase 85.26% 97.78%
CHEMBL226 P30542 Adenosine A1 receptor 84.57% 95.93%
CHEMBL3137262 O60341 LSD1/CoREST complex 83.48% 97.09%
CHEMBL4769 O95749 Geranylgeranyl pyrophosphate synthetase 83.44% 92.08%
CHEMBL1075162 Q13304 Uracil nucleotide/cysteinyl leukotriene receptor 81.42% 80.33%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 81.34% 85.14%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 80.07% 95.50%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Rhodiola crenulata
Rhodiola rosea

Cross-Links

Top
PubChem 162979766
LOTUS LTS0016800
wikiData Q105111747