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Solanum sitiens

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Table of Contents

Details
Description
Synonyms
Common Names
Subtypes (subspecies, varieties, subvarieties, forms)
Germination/Propagation
Distribution
Links to other databases
Genome
Scientific Literature
Phytochemical Profile
Biological Material
Contributors
Collections

Details Top

Internal ID UUID644041e735eb3772772838
Scientific name Solanum sitiens
Authority I.M.Johnst.
First published in Rev. Chil. Hist. Nat. 33: 25. 1929.

Description Top

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Synonyms Top

Scientific name Authority First published in
Lycopersicon sitiens (I.M.Johnst.) J.M.H.Shaw New Plantsman 5: 109. 1998.
Solanum rickii Correll Wrightia 2: 177. 1961.

Common names Top

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Subspecies (abbr. subsp./ssp.) Top

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Varieties (abbr. var.) Top

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Subvarieties (abbr. subvar.) Top

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Forms (abbr. f.) Top

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Germination/Propagation Top

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Distribution (via POWO/KEW) Top

Legend for the distribution data:
- Doubtful data
- Extinct
- Introduced
- Native

Links to other databases Top

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Database ID/link to page
World Flora Online wfo-0001031283
Tropicos 29603922
KEW urn:lsid:ipni.org:names:239719-2
The Plant List tro-29603922
Open Tree Of Life 250453
NCBI Taxonomy 315349
IUCN Red List 101529492
IPNI 239719-2
GBIF 2932141
EPPO SOLSJ
USDA GRIN 316502

Genomes (via NCBI) Top

Below is displayed the reference genome only!
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Accession Assembly
Name Level Submitter Released Coverage Size
GCA_016801875.1 ASM1680187v1 Scaffold Cranfield University 2021-02-02 200.0x 1.16 Gb

Scientific Literature Top

Below are displayed the latest 15 articles published in PMC (PubMed Central®) and other sources (DOI number only)!
If you wish to see all the related articles click here.
Title Authors Publication Released IDs
A practical assembly guideline for genomes with various levels of heterozygosity Mochizuki T, Sakamoto M, Tanizawa Y, Nakayama T, Tanifuji G, Kamikawa R, Nakamura Y Brief Bioinform 05-Oct-2023
PMCID:PMC10555665
doi:10.1093/bib/bbad337
PMID:37798248
Novel R2R3 MYB transcription factors regulate anthocyanin synthesis in Aubergine tomato plants Menconi J, Perata P, Gonzali S BMC Plant Biol 20-Mar-2023
PMCID:PMC10026432
doi:10.1186/s12870-023-04153-7
PMID:36935480
Crop Wild Relatives: A Valuable Source of Tolerance to Various Abiotic Stresses Kapazoglou A, Gerakari M, Lazaridi E, Kleftogianni K, Sarri E, Tani E, Bebeli PJ Plants (Basel) 10-Jan-2023
PMCID:PMC9861506
doi:10.3390/plants12020328
PMID:36679041
Tomato brown rugose fruit virus: An emerging and rapidly spreading plant RNA virus that threatens tomato production worldwide Zhang S, Griffiths JS, Marchand G, Bernards MA, Wang A Mol Plant Pathol 22-May-2022
PMCID:PMC9366064
doi:10.1111/mpp.13229
PMID:35598295
A Cysteine-Rich Protein, SpDIR1L, Implicated in S-RNase-Independent Pollen Rejection in the Tomato (Solanum Section Lycopersicon) Clade Muñoz-Sanz JV, Tovar-Méndez A, Lu L, Dai R, McClure B Int J Mol Sci 02-Dec-2021
PMCID:PMC8657656
doi:10.3390/ijms222313067
PMID:34884871
Climatic Diversity and Ecological Descriptors of Wild Tomato Species (Solanum sect. Lycopersicon) and Close Related Species (Solanum sect. Juglandifolia y sect. Lycopersicoides) in Latin America Ramírez-Ojeda G, Peralta IE, Rodríguez-Guzmán E, Chávez-Servia JL, Sahagún-Castellanos J, Rodríguez-Pérez JE Plants (Basel) 23-Apr-2021
PMCID:PMC8145878
doi:10.3390/plants10050855
PMID:33922706
De novo genome assembly of Solanum sitiens reveals structural variation associated with drought and salinity tolerance Molitor C, Kurowski TJ, Fidalgo de Almeida PM, Eerolla P, Spindlow DJ, Kashyap SP, Singh B, Prasanna HC, Thompson AJ, Mohareb FR Bioinformatics 30-Jan-2021
PMCID:PMC8496510
doi:10.1093/bioinformatics/btab048
PMID:33515237
Genes Encoding Recognition of the Cladosporium fulvum Effector Protein Ecp5 Are Encoded at Several Loci in the Tomato Genome Iakovidis M, Soumpourou E, Anderson E, Etherington G, Yourstone S, Thomas C G3 (Bethesda) 28-May-2020
PMCID:PMC7202015
doi:10.1534/g3.120.401119
PMID:32209596
Application of Genomic In Situ Hybridization in Horticultural Science Ramzan F, Younis A, Lim KB Int J Genomics 28-Mar-2017
PMCID:PMC5387808
doi:10.1155/2017/7561909
PMID:28459054
Indel Group in Genomes (IGG) Molecular Genetic Markers Toal TW, Burkart-Waco D, Howell T, Ron M, Kuppu S, Britt A, Chetelat R, Brady SM Plant Physiol 19-Jul-2016
PMCID:PMC5074621
doi:10.1104/pp.16.00354
PMID:27436831
Unravelling rootstock×scion interactions to improve food security Albacete A, Martínez-Andújar C, Martínez-Pérez A, Thompson AJ, Dodd IC, Pérez-Alfocea F J Exp Bot 09-Mar-2015
PMCID:PMC4986720
doi:10.1093/jxb/erv027
PMID:25754404
Linking the potato genome to the conserved ortholog set (COS) markers Lindqvist-Kreuze H, Cho K, Portal L, Rodríguez F, Simon R, Mueller LA, Spooner DM, Bonierbale M BMC Genet 08-Jun-2013
PMCID:PMC3691714
doi:10.1186/1471-2156-14-51
PMID:23758607
Callose plug deposition patterns vary in pollen tubes of Arabidopsis thaliana ecotypes and tomato species Qin P, Ting D, Shieh A, McCormick S BMC Plant Biol 03-Oct-2012
PMCID:PMC3502330
doi:10.1186/1471-2229-12-178
PMID:23034062
Genetic diversity and population structure in the tomato-like nightshades Solanum lycopersicoides and S. sitiens Albrecht E, Escobar M, Chetelat RT Ann Bot 13-Feb-2010
PMCID:PMC2850793
doi:10.1093/aob/mcq009
PMID:20154348
Chromosomal evolution and speciation: a recombination-based approach Livingstone K, Rieseberg L New Phytol 01-Jan-2004
PMCID:PMC2601666
doi:10.1046/j.1469-8137.2003.00942.x
PMID:19079643

Phytochemical Profile Top

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