|
A chromosome-scale assembly reveals chromosomal aberrations and exchanges generating genetic diversity in Coffea arabica germplasm
|
Scalabrin S, Magris G, Liva M, Vitulo N, Vidotto M, Scaglione D, Del Terra L, Ruosi MR, Navarini L, Pellegrino G, Berny Mier y Teran JC, Toniutti L, Suggi Liverani F, Cerutti M, Di Gaspero G, Morgante M |
Nat Commun |
23-Jan-2024 |
|
|
High quality genomes produced from single MinION flow cells clarify polyploid and demographic histories of critically endangered Fraxinus (ash) species
|
Fleck SJ, Tomlin C, da Silva Coelho FA, Richter M, Danielson ES, Backenstose N, Krabbenhoft T, Lindqvist C, Albert VA |
Commun Biol |
06-Jan-2024 |
|
|
Genome mining of metabolic gene clusters in the Rubiaceae family
|
Correia de Lemos SM, Paschoal AR, Guyot R, Medema M, Domingues DS |
Comput Struct Biotechnol J |
20-Nov-2023 |
|
|
A target enrichment probe set for resolving phylogenetic relationships in the coffee family, Rubiaceae
|
Ball LD, Bedoya AM, Taylor CM, Lagomarsino LP |
Appl Plant Sci |
17-Nov-2023 |
|
|
Efficient homology‐based annotation of transposable elements using minimizers
|
Gonzalez‐García LN, Lozano‐Arce D, Londoño JP, Guyot R, Duitama J |
Appl Plant Sci |
11-May-2023 |
|
|
Inpactor2: a software based on deep learning to identify and classify LTR-retrotransposons in plant genomes
|
Orozco-Arias S, Humberto Lopez-Murillo L, Candamil-Cortés MS, Arias M, Jaimes PA, Rossi Paschoal A, Tabares-Soto R, Isaza G, Guyot R |
Brief Bioinform |
10-Dec-2022 |
|
|
Potential allopolyploid origin of Ericales revealed with gene-tree reconciliation
|
Nie S, Tian XC, Kong L, Zhao SW, Chen ZY, Jiao SQ, El-Kassaby YA, Porth I, Yang FS, Zhao W, Mao JF |
Front Plant Sci |
15-Nov-2022 |
|
|
Automatic curation of LTR retrotransposon libraries from plant genomes through machine learning
|
Orozco-Arias S, Candamil-Cortes MS, Jaimes PA, Valencia-Castrillon E, Tabares-Soto R, Isaza G, Guyot R |
J Integr Bioinform |
12-Jul-2022 |
|
|
The absence of the caffeine synthase gene is involved in the naturally decaffeinated status of Coffea humblotiana, a wild species from Comoro archipelago
|
Raharimalala N, Rombauts S, McCarthy A, Garavito A, Orozco-Arias S, Bellanger L, Morales-Correa AY, Froger S, Michaux S, Berry V, Metairon S, Fournier C, Lepelley M, Mueller L, Couturon E, Hamon P, Rakotomalala JJ, Descombes P, Guyot R, Crouzillat D |
Sci Rep |
14-Apr-2021 |
|
|
Terminal-Repeat Retrotransposons with GAG Domain in Plant Genomes: A New Testimony on the Complex World of Transposable Elements
|
Chaparro C, Gayraud T, de Souza RF, Domingues DS, Akaffou S, Laforga Vanzela AL, de Kochko A, Rigoreau M, Crouzillat D, Hamon S, Hamon P, Guyot R |
Genome Biol Evol |
07-Jan-2015 |
|
|
Genetic structure and diversity of coffee (Coffea) across Africa and the Indian Ocean islands revealed using microsatellites
|
Razafinarivo NJ, Guyot R, Davis AP, Couturon E, Hamon S, Crouzillat D, Rigoreau M, Dubreuil-Tranchant C, Poncet V, De Kochko A, Rakotomalala JJ, Hamon P |
Ann Bot |
28-Dec-2012 |
|
|
Towards a Phylogeny for Coffea (Rubiaceae): Identifying Well-supported Lineages Based on Nuclear and Plastid DNA Sequences
|
Maurin O, Davis AP, Chester M, Mvungi EF, Jaufeerally-Fakim Y, Fay MF |
Ann Bot |
22-Oct-2007 |
|
