Coffea humblotiana
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Table of Contents
Details Top
| Internal ID | UUID6440336ac8a43891453897 |
| Scientific name | Coffea humblotiana |
| Authority | Baill. |
| First published in | Bull. Mens. Soc. Linn. Paris 1: 514 (1885) |
Description Top
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Synonyms Top
| Scientific name | Authority | First published in |
|---|---|---|
| Coffea arabica var. humblotiana | (Baill.) A.Froehner | Bot. Jahrb. Syst. 25: 264. 1898 |
| Coffea arabica var. rachiformis | (Baill.) A.Froehner | Bot. Jahrb. Syst. 25: 264. 1898 |
| Coffea rachiformis | Baill. | Bull. Mens. Soc. Linn. Paris 1: 514 (1885) |
Germination/Propagation Top
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No germination or propagation data was added yet.
Distribution (via POWO/KEW) Top
Legend for the distribution data:
- Doubtful data
- Extinct
- Introduced
- Native
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Africa click to expand
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Western Indian Ocean
- Comoros
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Western Indian Ocean
Links to other databases Top
Suggest others/fix!| Database | ID/link to page |
|---|---|
| World Flora Online | wfo-0000911043 |
| Tropicos | 27905938 |
| INPN | 807255 |
| KEW | urn:lsid:ipni.org:names:747136-1 |
| The Plant List | kew-45566 |
| Open Tree Of Life | 1073962 |
| NCBI Taxonomy | 59211 |
| IUCN Red List | 108652718 |
| IPNI | 747136-1 |
| GBIF | 2895499 |
| EOL | 1110059 |
| USDA GRIN | 466227 |
Genomes (via NCBI) Top
Below is displayed the reference genome only!
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| Accession | Assembly | |||||
|---|---|---|---|---|---|---|
| Name | Level | Submitter | Released | Coverage | Size | |
| GCA_023065735.1 | IRD_Cohum_1.0 | Chromosome | Institut de Recherche pour le Developpement | 2022-04-22 | 102.0x | 398.71 Mb |
Scientific Literature Top
Below are displayed the latest 15 articles published in PMC (PubMed Central®) and other sources (DOI number only)!
If you wish to see all the related articles click here.
If you wish to see all the related articles click here.
| Title | Authors | Publication | Released | IDs | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| High quality genomes produced from single MinION flow cells clarify polyploid and demographic histories of critically endangered Fraxinus (ash) species | Fleck SJ, Tomlin C, da Silva Coelho FA, Richter M, Danielson ES, Backenstose N, Krabbenhoft T, Lindqvist C, Albert VA | Commun Biol | 06-Jan-2024 |
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| A target enrichment probe set for resolving phylogenetic relationships in the coffee family, Rubiaceae | Ball LD, Bedoya AM, Taylor CM, Lagomarsino LP | Appl Plant Sci | 17-Nov-2023 |
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| Efficient homology‐based annotation of transposable elements using minimizers | Gonzalez‐García LN, Lozano‐Arce D, Londoño JP, Guyot R, Duitama J | Appl Plant Sci | 11-May-2023 |
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| Inpactor2: a software based on deep learning to identify and classify LTR-retrotransposons in plant genomes | Orozco-Arias S, Humberto Lopez-Murillo L, Candamil-Cortés MS, Arias M, Jaimes PA, Rossi Paschoal A, Tabares-Soto R, Isaza G, Guyot R | Brief Bioinform | 10-Dec-2022 |
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| Potential allopolyploid origin of Ericales revealed with gene-tree reconciliation | Nie S, Tian XC, Kong L, Zhao SW, Chen ZY, Jiao SQ, El-Kassaby YA, Porth I, Yang FS, Zhao W, Mao JF | Front Plant Sci | 15-Nov-2022 |
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| Automatic curation of LTR retrotransposon libraries from plant genomes through machine learning | Orozco-Arias S, Candamil-Cortes MS, Jaimes PA, Valencia-Castrillon E, Tabares-Soto R, Isaza G, Guyot R | J Integr Bioinform | 12-Jul-2022 |
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| The absence of the caffeine synthase gene is involved in the naturally decaffeinated status of Coffea humblotiana, a wild species from Comoro archipelago | Raharimalala N, Rombauts S, McCarthy A, Garavito A, Orozco-Arias S, Bellanger L, Morales-Correa AY, Froger S, Michaux S, Berry V, Metairon S, Fournier C, Lepelley M, Mueller L, Couturon E, Hamon P, Rakotomalala JJ, Descombes P, Guyot R, Crouzillat D | Sci Rep | 14-Apr-2021 |
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| Terminal-Repeat Retrotransposons with GAG Domain in Plant Genomes: A New Testimony on the Complex World of Transposable Elements | Chaparro C, Gayraud T, de Souza RF, Domingues DS, Akaffou S, Laforga Vanzela AL, de Kochko A, Rigoreau M, Crouzillat D, Hamon S, Hamon P, Guyot R | Genome Biol Evol | 07-Jan-2015 |
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| Genetic structure and diversity of coffee (Coffea) across Africa and the Indian Ocean islands revealed using microsatellites | Razafinarivo NJ, Guyot R, Davis AP, Couturon E, Hamon S, Crouzillat D, Rigoreau M, Dubreuil-Tranchant C, Poncet V, De Kochko A, Rakotomalala JJ, Hamon P | Ann Bot | 28-Dec-2012 |
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| Towards a Phylogeny for Coffea (Rubiaceae): Identifying Well-supported Lineages Based on Nuclear and Plastid DNA Sequences | Maurin O, Davis AP, Chester M, Mvungi EF, Jaufeerally-Fakim Y, Fay MF | Ann Bot | 22-Oct-2007 |
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Phytochemical Profile Top
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Collections Top
| In private collections | 0 |
| In public collections | 0 |