Withalongolide A

Details

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Internal ID 3c8028d0-4fa6-4f41-98ac-77185eda6e60
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroid lactones > Withanolides and derivatives
IUPAC Name (1S,2S,6S,7R,9R,11S,12S,15R,16S)-6-hydroxy-2-(hydroxymethyl)-15-[(1S)-1-[(2R)-5-(hydroxymethyl)-4-methyl-6-oxo-2,3-dihydropyran-2-yl]ethyl]-16-methyl-8-oxapentacyclo[9.7.0.02,7.07,9.012,16]octadec-4-en-3-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C28H38O7/c1-14-10-21(34-25(33)17(14)12-29)15(2)18-4-5-19-16-11-24-28(35-24)23(32)7-6-22(31)27(28,13-30)20(16)8-9-26(18,19)3/h6-7,15-16,18-21,23-24,29-30,32H,4-5,8-13H2,1-3H3/t15-,16-,18+,19-,20-,21+,23-,24+,26+,27-,28+/m0/s1
InChI Key FJMXKFSOKLFYRC-CKNDUULBSA-N
Popularity 6 references in papers

Physical and Chemical Properties

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Molecular Formula C28H38O7
Molecular Weight 486.60 g/mol
Exact Mass 486.26175355 g/mol
Topological Polar Surface Area (TPSA) 117.00 Ų
XlogP 3.20
Atomic LogP (AlogP) 2.33
H-Bond Acceptor 7
H-Bond Donor 3
Rotatable Bonds 4

Synonyms

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19-hydroxywithaferin A
CHEBI:69106
1350448-42-8
(4beta,5beta,6beta,22R)-4,19,27-trihydroxy-5,6:22,26-diepoxyergosta-2,24-diene-1,26-dione
RefChem:194905
19-hydroxy-Withaferin A
CHEMBL1934449
SCHEMBL30475075
DTXSID701316661
Q27137447

2D Structure

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2D Structure of Withalongolide A

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8498 84.98%
Caco-2 - 0.7411 74.11%
Blood Brain Barrier + 0.6250 62.50%
Human oral bioavailability + 0.5571 55.71%
Subcellular localzation Mitochondria 0.7593 75.93%
OATP2B1 inhibitior - 0.7138 71.38%
OATP1B1 inhibitior + 0.8347 83.47%
OATP1B3 inhibitior + 0.9670 96.70%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.5771 57.71%
BSEP inhibitior + 0.9259 92.59%
P-glycoprotein inhibitior + 0.5740 57.40%
P-glycoprotein substrate + 0.5949 59.49%
CYP3A4 substrate + 0.7382 73.82%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8921 89.21%
CYP3A4 inhibition - 0.8840 88.40%
CYP2C9 inhibition - 0.8986 89.86%
CYP2C19 inhibition - 0.9229 92.29%
CYP2D6 inhibition - 0.9499 94.99%
CYP1A2 inhibition - 0.8151 81.51%
CYP2C8 inhibition + 0.5242 52.42%
CYP inhibitory promiscuity - 0.9464 94.64%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.5252 52.52%
Eye corrosion - 0.9893 98.93%
Eye irritation - 0.9676 96.76%
Skin irritation - 0.5143 51.43%
Skin corrosion - 0.9333 93.33%
Ames mutagenesis - 0.5548 55.48%
Human Ether-a-go-go-Related Gene inhibition - 0.4061 40.61%
Micronuclear - 0.7200 72.00%
Hepatotoxicity + 0.5342 53.42%
skin sensitisation - 0.8837 88.37%
Respiratory toxicity + 0.8667 86.67%
Reproductive toxicity + 0.8889 88.89%
Mitochondrial toxicity + 0.7500 75.00%
Nephrotoxicity - 0.6044 60.44%
Acute Oral Toxicity (c) I 0.6979 69.79%
Estrogen receptor binding + 0.7832 78.32%
Androgen receptor binding + 0.7915 79.15%
Thyroid receptor binding + 0.5210 52.10%
Glucocorticoid receptor binding + 0.7732 77.32%
Aromatase binding + 0.7266 72.66%
PPAR gamma + 0.5491 54.91%
Honey bee toxicity - 0.7191 71.91%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.5400 54.00%
Fish aquatic toxicity + 0.9595 95.95%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 95.92% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.33% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.49% 95.56%
CHEMBL3137262 O60341 LSD1/CoREST complex 91.89% 97.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 88.52% 91.11%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 88.12% 95.89%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 88.11% 97.14%
CHEMBL2996 Q05655 Protein kinase C delta 87.04% 97.79%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.10% 86.33%
CHEMBL1994 P08235 Mineralocorticoid receptor 85.78% 100.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 85.77% 99.23%
CHEMBL5103 Q969S8 Histone deacetylase 10 85.76% 90.08%
CHEMBL221 P23219 Cyclooxygenase-1 85.03% 90.17%
CHEMBL5028 O14672 ADAM10 82.08% 97.50%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 81.99% 82.69%
CHEMBL3401 O75469 Pregnane X receptor 81.48% 94.73%
CHEMBL5608 Q16288 NT-3 growth factor receptor 80.17% 95.89%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 80.15% 94.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Bixa orellana
Physalis longifolia

Cross-Links

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PubChem 56649343
NPASS NPC709
ChEMBL CHEMBL1934449
LOTUS LTS0011020
wikiData Q105276128