Vinervine

Details

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Internal ID 9a390b5d-f208-4ce7-87af-c552ca44db47
Taxonomy Alkaloids and derivatives > Strychnos alkaloids
IUPAC Name methyl (1R,11S,12E,17S)-12-ethylidene-6-hydroxy-8,14-diazapentacyclo[9.5.2.01,9.02,7.014,17]octadeca-2(7),3,5,9-tetraene-10-carboxylate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C20H22N2O3/c1-3-11-10-22-8-7-20-13-5-4-6-14(23)17(13)21-18(20)16(19(24)25-2)12(11)9-15(20)22/h3-6,12,15,21,23H,7-10H2,1-2H3/b11-3-/t12-,15-,20+/m0/s1
InChI Key FAJVFJABOWWACZ-GGGKWMOSSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C20H22N2O3
Molecular Weight 338.40 g/mol
Exact Mass 338.16304257 g/mol
Topological Polar Surface Area (TPSA) 61.80 Ų
XlogP 2.00
Atomic LogP (AlogP) 2.54
H-Bond Acceptor 5
H-Bond Donor 2
Rotatable Bonds 1

Synonyms

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(-)-Vinervine
12-Hydroxyakuammicine
QJ6XQD4UFS
Curan-17-oic acid, 2,16,19,20-tetradehydro-12-hydroxy-, methyl ester, (19E)-
methyl (1R,11S,12E,17S)-12-ethylidene-6-hydroxy-8,14-diazapentacyclo[9.5.2.01,9.02,7.014,17]octadeca-2(7),3,5,9-tetraene-10-carboxylate
(1R,11S,12E,17S)-12-ethylidene-8,14-diazapentacyclo(9.5.2.01,9.02,7.014,17)octadeca-2,4,6,9-tetraene-10-carboxylic acid
(1R,11S,12E,17S)-12-ethylidene-8,14-diazapentacyclo[9.5.2.01,9.02,7.014,17]octadeca-2,4,6,9-tetraene-10-carboxylic acid
methyl (1R,11S,12E,17S)-12-ethylidene-6-hydroxy-8,14-diazapentacyclo(9.5.2.01,9.02,7.014,17)octadeca-2(7),3,5,9-tetraene-10-carboxylate
RefChem:194286
UNII-QJ6XQD4UFS
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Vinervine

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9064 90.64%
Caco-2 + 0.8773 87.73%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.6571 65.71%
Subcellular localzation Mitochondria 0.8323 83.23%
OATP2B1 inhibitior - 0.8580 85.80%
OATP1B1 inhibitior + 0.9218 92.18%
OATP1B3 inhibitior + 0.9382 93.82%
MATE1 inhibitior - 0.6600 66.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior + 0.5904 59.04%
P-glycoprotein inhibitior - 0.7095 70.95%
P-glycoprotein substrate + 0.6429 64.29%
CYP3A4 substrate + 0.6735 67.35%
CYP2C9 substrate - 0.8052 80.52%
CYP2D6 substrate - 0.8290 82.90%
CYP3A4 inhibition - 0.8996 89.96%
CYP2C9 inhibition - 0.8048 80.48%
CYP2C19 inhibition - 0.8356 83.56%
CYP2D6 inhibition + 0.5000 50.00%
CYP1A2 inhibition - 0.6974 69.74%
CYP2C8 inhibition + 0.6100 61.00%
CYP inhibitory promiscuity - 0.7991 79.91%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Non-required 0.5691 56.91%
Eye corrosion - 0.9857 98.57%
Eye irritation - 0.9948 99.48%
Skin irritation - 0.7535 75.35%
Skin corrosion - 0.9274 92.74%
Ames mutagenesis - 0.6700 67.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4291 42.91%
Micronuclear + 0.7400 74.00%
Hepatotoxicity - 0.5400 54.00%
skin sensitisation - 0.8227 82.27%
Respiratory toxicity + 0.8444 84.44%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity + 0.9375 93.75%
Nephrotoxicity + 0.4724 47.24%
Acute Oral Toxicity (c) III 0.5407 54.07%
Estrogen receptor binding + 0.5937 59.37%
Androgen receptor binding + 0.6515 65.15%
Thyroid receptor binding + 0.5654 56.54%
Glucocorticoid receptor binding + 0.7345 73.45%
Aromatase binding - 0.5282 52.82%
PPAR gamma + 0.5174 51.74%
Honey bee toxicity - 0.8644 86.44%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.6200 62.00%
Fish aquatic toxicity + 0.9667 96.67%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.12% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.83% 91.11%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 95.98% 94.45%
CHEMBL4208 P20618 Proteasome component C5 90.34% 90.00%
CHEMBL2581 P07339 Cathepsin D 89.84% 98.95%
CHEMBL3137262 O60341 LSD1/CoREST complex 89.54% 97.09%
CHEMBL2535 P11166 Glucose transporter 89.32% 98.75%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 88.33% 85.14%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 87.89% 95.56%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 86.51% 93.03%
CHEMBL5608 Q16288 NT-3 growth factor receptor 86.41% 95.89%
CHEMBL2041 P07949 Tyrosine-protein kinase receptor RET 85.94% 91.79%
CHEMBL1914 P06276 Butyrylcholinesterase 84.57% 95.00%
CHEMBL5028 O14672 ADAM10 84.05% 97.50%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 83.34% 99.23%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.15% 86.33%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Alstonia spatulata

Cross-Links

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PubChem 6875257
NPASS NPC166669
LOTUS LTS0116608
wikiData Q27138834