Vibsanin R

Details

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Internal ID 98495676-408c-4c39-abaf-bd0afa6cad86
Taxonomy Lipids and lipid-like molecules > Fatty Acyls > Fatty acid esters
IUPAC Name [(1R,2R,3E,5S,7E,11S)-8-(hydroxymethyl)-1,5-dimethyl-5-[(2E)-4-methylpenta-2,4-dienyl]-12-oxabicyclo[9.1.0]dodeca-3,7-dien-2-yl] 3-methylbut-2-enoate
SMILES (Canonical) CC(=CC(=O)OC1C=CC(CC=C(CCC2C1(O2)C)CO)(C)CC=CC(=C)C)C
SMILES (Isomeric) CC(=CC(=O)O[C@@H]1/C=C/[C@@](C/C=C(\CC[C@H]2[C@]1(O2)C)/CO)(C)C/C=C/C(=C)C)C
InChI InChI=1S/C25H36O4/c1-18(2)8-7-13-24(5)14-11-20(17-26)9-10-22-25(6,29-22)21(12-15-24)28-23(27)16-19(3)4/h7-8,11-12,15-16,21-22,26H,1,9-10,13-14,17H2,2-6H3/b8-7+,15-12+,20-11+/t21-,22+,24+,25+/m1/s1
InChI Key CZECWCCJJGKHQY-HFHNTLNYSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C25H36O4
Molecular Weight 400.50 g/mol
Exact Mass 400.26135963 g/mol
Topological Polar Surface Area (TPSA) 59.10 Ų
XlogP 5.30
Atomic LogP (AlogP) 5.21
H-Bond Acceptor 4
H-Bond Donor 1
Rotatable Bonds 6

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Vibsanin R

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9608 96.08%
Caco-2 + 0.6081 60.81%
Blood Brain Barrier + 0.7000 70.00%
Human oral bioavailability - 0.7571 75.71%
Subcellular localzation Mitochondria 0.7657 76.57%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8592 85.92%
OATP1B3 inhibitior + 0.8834 88.34%
MATE1 inhibitior - 0.9212 92.12%
OCT2 inhibitior + 0.5724 57.24%
BSEP inhibitior + 0.9614 96.14%
P-glycoprotein inhibitior + 0.6835 68.35%
P-glycoprotein substrate + 0.5126 51.26%
CYP3A4 substrate + 0.6740 67.40%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8934 89.34%
CYP3A4 inhibition - 0.6237 62.37%
CYP2C9 inhibition + 0.5094 50.94%
CYP2C19 inhibition - 0.6484 64.84%
CYP2D6 inhibition - 0.9368 93.68%
CYP1A2 inhibition + 0.5096 50.96%
CYP2C8 inhibition + 0.5919 59.19%
CYP inhibitory promiscuity - 0.9167 91.67%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.8700 87.00%
Carcinogenicity (trinary) Non-required 0.6516 65.16%
Eye corrosion - 0.9821 98.21%
Eye irritation - 0.9314 93.14%
Skin irritation - 0.6077 60.77%
Skin corrosion - 0.9496 94.96%
Ames mutagenesis - 0.5707 57.07%
Human Ether-a-go-go-Related Gene inhibition + 0.6886 68.86%
Micronuclear - 0.7000 70.00%
Hepatotoxicity - 0.5851 58.51%
skin sensitisation - 0.7755 77.55%
Respiratory toxicity + 0.6222 62.22%
Reproductive toxicity + 0.6222 62.22%
Mitochondrial toxicity - 0.5875 58.75%
Nephrotoxicity - 0.5539 55.39%
Acute Oral Toxicity (c) III 0.6152 61.52%
Estrogen receptor binding + 0.8475 84.75%
Androgen receptor binding + 0.5465 54.65%
Thyroid receptor binding + 0.7184 71.84%
Glucocorticoid receptor binding + 0.8371 83.71%
Aromatase binding + 0.7480 74.80%
PPAR gamma + 0.6806 68.06%
Honey bee toxicity - 0.7191 71.91%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity + 0.5300 53.00%
Fish aquatic toxicity + 0.9752 97.52%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.69% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.41% 91.11%
CHEMBL2581 P07339 Cathepsin D 91.15% 98.95%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.86% 94.45%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 88.23% 95.56%
CHEMBL253 P34972 Cannabinoid CB2 receptor 87.62% 97.25%
CHEMBL1994 P08235 Mineralocorticoid receptor 87.45% 100.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 86.91% 95.89%
CHEMBL340 P08684 Cytochrome P450 3A4 86.45% 91.19%
CHEMBL1806 P11388 DNA topoisomerase II alpha 85.47% 89.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 85.26% 86.33%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 84.35% 92.62%
CHEMBL3060 Q9Y345 Glycine transporter 2 83.57% 99.17%
CHEMBL3137262 O60341 LSD1/CoREST complex 83.49% 97.09%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 83.44% 91.07%
CHEMBL2061 P19793 Retinoid X receptor alpha 82.43% 91.67%
CHEMBL226 P30542 Adenosine A1 receptor 81.84% 95.93%
CHEMBL3401 O75469 Pregnane X receptor 81.65% 94.73%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Berberis japonica
Isodon nervosus
Isodon xerophilus
Lonicera macrantha

Cross-Links

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PubChem 11258097
NPASS NPC61527