Variabilin

Details

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Internal ID 7d20abb1-9d25-47ec-a447-f0b1278ba0fe
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene lactones > Diterpene lactones
IUPAC Name (5Z)-5-[(6E,10E)-13-(furan-3-yl)-2,6,10-trimethyltrideca-6,10-dienylidene]-4-hydroxy-3-methylfuran-2-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C25H34O4/c1-18(8-5-9-19(2)11-7-13-22-14-15-28-17-22)10-6-12-20(3)16-23-24(26)21(4)25(27)29-23/h8,11,14-17,20,26H,5-7,9-10,12-13H2,1-4H3/b18-8+,19-11+,23-16-
InChI Key HPVSJNGZYYDDMU-FECKPXKMSA-N
Popularity 18 references in papers

Physical and Chemical Properties

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Molecular Formula C25H34O4
Molecular Weight 398.50 g/mol
Exact Mass 398.24570956 g/mol
Topological Polar Surface Area (TPSA) 59.70 Ų
XlogP 6.90
Atomic LogP (AlogP) 6.96
H-Bond Acceptor 4
H-Bond Donor 1
Rotatable Bonds 11

Synonyms

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51847-87-1
3-Methyl-4-hydroxy-5-[(1Z,6E,10E)-2,6,10-trimethyl-13-(3-furyl)-6,10-tridecadiene-1-ylidene]furan-2(5H)-one
CHEMBL463244
SCHEMBL4116811
NSC227263
NSC-227263
(5Z)-5-[(6E,10E)-13-(furan-3-yl)-2,6,10-trimethyltrideca-6,10-dienylidene]-4-hydroxy-3-methylfuran-2-one

2D Structure

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2D Structure of Variabilin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9737 97.37%
Caco-2 + 0.6059 60.59%
Blood Brain Barrier + 0.7000 70.00%
Human oral bioavailability - 0.6571 65.71%
Subcellular localzation Mitochondria 0.6474 64.74%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7664 76.64%
OATP1B3 inhibitior + 0.8938 89.38%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 0.7500 75.00%
BSEP inhibitior + 0.6175 61.75%
P-glycoprotein inhibitior + 0.8207 82.07%
P-glycoprotein substrate - 0.5979 59.79%
CYP3A4 substrate + 0.6422 64.22%
CYP2C9 substrate + 1.0000 100.00%
CYP2D6 substrate - 0.8896 88.96%
CYP3A4 inhibition - 0.6128 61.28%
CYP2C9 inhibition - 0.7574 75.74%
CYP2C19 inhibition - 0.6123 61.23%
CYP2D6 inhibition - 0.8811 88.11%
CYP1A2 inhibition + 0.6019 60.19%
CYP2C8 inhibition - 0.5829 58.29%
CYP inhibitory promiscuity - 0.8075 80.75%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.8739 87.39%
Carcinogenicity (trinary) Non-required 0.5061 50.61%
Eye corrosion - 0.9772 97.72%
Eye irritation - 0.9243 92.43%
Skin irritation - 0.5254 52.54%
Skin corrosion - 0.9506 95.06%
Ames mutagenesis - 0.7800 78.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8040 80.40%
Micronuclear - 0.8500 85.00%
Hepatotoxicity - 0.5750 57.50%
skin sensitisation - 0.7727 77.27%
Respiratory toxicity + 0.7000 70.00%
Reproductive toxicity - 0.5941 59.41%
Mitochondrial toxicity - 0.5375 53.75%
Nephrotoxicity - 0.5831 58.31%
Acute Oral Toxicity (c) III 0.5371 53.71%
Estrogen receptor binding - 0.5122 51.22%
Androgen receptor binding - 0.5873 58.73%
Thyroid receptor binding + 0.6446 64.46%
Glucocorticoid receptor binding + 0.7607 76.07%
Aromatase binding + 0.5579 55.79%
PPAR gamma + 0.7161 71.61%
Honey bee toxicity - 0.8795 87.95%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity - 0.5100 51.00%
Fish aquatic toxicity + 0.9907 99.07%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 800 nM
IC50
via Super-PRED

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 98.05% 98.95%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.11% 91.11%
CHEMBL3401 O75469 Pregnane X receptor 95.81% 94.73%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 92.10% 94.45%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 91.21% 90.71%
CHEMBL3060 Q9Y345 Glycine transporter 2 90.61% 99.17%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 89.59% 95.56%
CHEMBL3359 P21462 Formyl peptide receptor 1 85.58% 93.56%
CHEMBL1806 P11388 DNA topoisomerase II alpha 85.56% 89.00%
CHEMBL4769 O95749 Geranylgeranyl pyrophosphate synthetase 84.03% 92.08%
CHEMBL1907 P15144 Aminopeptidase N 82.30% 93.31%
CHEMBL1293249 Q13887 Kruppel-like factor 5 82.21% 86.33%
CHEMBL5409 Q8TDU6 G-protein coupled bile acid receptor 1 81.86% 93.65%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Ononis viscosa

Cross-Links

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PubChem 54678431
LOTUS LTS0069120
wikiData Q104395016