Tubulosine

Details

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Internal ID fe893580-b0dd-45fc-ac03-b00fdc57d8c6
Taxonomy Alkaloids and derivatives > Harmala alkaloids
IUPAC Name (1R)-1-[[(2S,3R,11bS)-3-ethyl-9,10-dimethoxy-2,3,4,6,7,11b-hexahydro-1H-benzo[a]quinolizin-2-yl]methyl]-2,3,4,9-tetrahydro-1H-pyrido[3,4-b]indol-6-ol
SMILES (Canonical) CCC1CN2CCC3=CC(=C(C=C3C2CC1CC4C5=C(CCN4)C6=C(N5)C=CC(=C6)O)OC)OC
SMILES (Isomeric) CC[C@H]1CN2CCC3=CC(=C(C=C3[C@@H]2C[C@@H]1C[C@@H]4C5=C(CCN4)C6=C(N5)C=CC(=C6)O)OC)OC
InChI InChI=1S/C29H37N3O3/c1-4-17-16-32-10-8-18-13-27(34-2)28(35-3)15-22(18)26(32)12-19(17)11-25-29-21(7-9-30-25)23-14-20(33)5-6-24(23)31-29/h5-6,13-15,17,19,25-26,30-31,33H,4,7-12,16H2,1-3H3/t17-,19-,25+,26-/m0/s1
InChI Key JRVWIILYWSBUMC-PRUVNFMMSA-N
Popularity 16 references in papers

Physical and Chemical Properties

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Molecular Formula C29H37N3O3
Molecular Weight 475.60 g/mol
Exact Mass 475.28349205 g/mol
Topological Polar Surface Area (TPSA) 69.80 Ų
XlogP 4.60
Atomic LogP (AlogP) 5.11
H-Bond Acceptor 5
H-Bond Donor 3
Rotatable Bonds 5

Synonyms

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Tubulosan-8'-ol, 10,11-dimethoxy-
2632-29-3
Marckine
CHEBI:9775
10,11-Dimethoxytubulosan-8'-ol
10,11-Dimethoxytubulosanol
112A6Z7SN5
NSC131547
NSC 131547
NSC-131547
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Tubulosine

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9686 96.86%
Caco-2 - 0.5567 55.67%
Blood Brain Barrier + 0.6000 60.00%
Human oral bioavailability - 0.8286 82.86%
Subcellular localzation Mitochondria 0.4811 48.11%
OATP2B1 inhibitior - 0.7140 71.40%
OATP1B1 inhibitior + 0.8403 84.03%
OATP1B3 inhibitior + 0.9268 92.68%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 0.7500 75.00%
BSEP inhibitior + 0.9916 99.16%
P-glycoprotein inhibitior + 0.7579 75.79%
P-glycoprotein substrate + 0.9343 93.43%
CYP3A4 substrate + 0.6923 69.23%
CYP2C9 substrate - 0.8037 80.37%
CYP2D6 substrate + 0.6979 69.79%
CYP3A4 inhibition - 0.8797 87.97%
CYP2C9 inhibition - 0.9071 90.71%
CYP2C19 inhibition - 0.9025 90.25%
CYP2D6 inhibition + 0.8931 89.31%
CYP1A2 inhibition - 0.9046 90.46%
CYP2C8 inhibition + 0.6777 67.77%
CYP inhibitory promiscuity - 0.8681 86.81%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.6931 69.31%
Eye corrosion - 0.9887 98.87%
Eye irritation - 0.9789 97.89%
Skin irritation - 0.7425 74.25%
Skin corrosion - 0.9295 92.95%
Ames mutagenesis - 0.7300 73.00%
Human Ether-a-go-go-Related Gene inhibition + 0.9531 95.31%
Micronuclear + 0.6200 62.00%
Hepatotoxicity - 0.7000 70.00%
skin sensitisation - 0.8784 87.84%
Respiratory toxicity + 0.8222 82.22%
Reproductive toxicity + 0.9556 95.56%
Mitochondrial toxicity + 0.9500 95.00%
Nephrotoxicity - 0.7089 70.89%
Acute Oral Toxicity (c) III 0.5935 59.35%
Estrogen receptor binding + 0.8168 81.68%
Androgen receptor binding + 0.8053 80.53%
Thyroid receptor binding + 0.6942 69.42%
Glucocorticoid receptor binding + 0.7649 76.49%
Aromatase binding + 0.5677 56.77%
PPAR gamma + 0.5237 52.37%
Honey bee toxicity - 0.7817 78.17%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity + 0.5551 55.51%
Fish aquatic toxicity - 0.3722 37.22%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 10 nM
Potency
via Super-PRED
CHEMBL1293232 Q16637 Survival motor neuron protein 707.9 nM
Potency
via Super-PRED

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.27% 96.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 98.58% 94.45%
CHEMBL241 Q14432 Phosphodiesterase 3A 98.33% 92.94%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.52% 91.11%
CHEMBL3192 Q9BY41 Histone deacetylase 8 95.20% 93.99%
CHEMBL2535 P11166 Glucose transporter 94.52% 98.75%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.70% 97.09%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 91.88% 89.62%
CHEMBL2581 P07339 Cathepsin D 91.65% 98.95%
CHEMBL217 P14416 Dopamine D2 receptor 90.32% 95.62%
CHEMBL2041 P07949 Tyrosine-protein kinase receptor RET 89.90% 91.79%
CHEMBL213 P08588 Beta-1 adrenergic receptor 89.32% 95.56%
CHEMBL3060 Q9Y345 Glycine transporter 2 89.01% 99.17%
CHEMBL5608 Q16288 NT-3 growth factor receptor 88.78% 95.89%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.83% 86.33%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 87.60% 95.89%
CHEMBL206 P03372 Estrogen receptor alpha 85.97% 97.64%
CHEMBL5747 Q92793 CREB-binding protein 85.68% 95.12%
CHEMBL3438 Q05513 Protein kinase C zeta 85.27% 88.48%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 84.74% 91.71%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 84.29% 95.56%
CHEMBL2069156 Q14145 Kelch-like ECH-associated protein 1 84.24% 82.38%
CHEMBL1991 O14920 Inhibitor of nuclear factor kappa B kinase beta subunit 82.85% 97.15%
CHEMBL4657 Q6V1X1 Dipeptidyl peptidase VIII 81.71% 97.21%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 81.44% 94.00%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 81.42% 92.62%
CHEMBL255 P29275 Adenosine A2b receptor 80.47% 98.59%
CHEMBL5852 Q96P65 Pyroglutamylated RFamide peptide receptor 80.20% 85.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Alangium longiflorum
Carapichea ipecacuanha
Pogonopus speciosus
Pogonopus tubulosus

Cross-Links

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PubChem 72341
NPASS NPC280272
LOTUS LTS0223020
wikiData Q27108491