(3'S,4'S,9S,9aS)-4'-hydroxy-3'-methylspiro[2,5,6,7,8,9a-hexahydro-1H-pyrrolo[1,2-a]azepine-9,5'-oxolane]-2',3-dione

Details

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Internal ID 1ba599be-a663-4497-a89a-c67b1d12df29
Taxonomy Alkaloids and derivatives > Stemona alkaloids > Tuberostemospironine-type alkaloids
IUPAC Name (3'S,4'S,9S,9aS)-4'-hydroxy-3'-methylspiro[2,5,6,7,8,9a-hexahydro-1H-pyrrolo[1,2-a]azepine-9,5'-oxolane]-2',3-dione
SMILES (Canonical) CC1C(C2(CCCCN3C2CCC3=O)OC1=O)O
SMILES (Isomeric) C[C@H]1[C@@H]([C@@]2(CCCCN3[C@H]2CCC3=O)OC1=O)O
InChI InChI=1S/C13H19NO4/c1-8-11(16)13(18-12(8)17)6-2-3-7-14-9(13)4-5-10(14)15/h8-9,11,16H,2-7H2,1H3/t8-,9-,11-,13-/m0/s1
InChI Key FPBTZQXLGBERTH-PZEZNAACSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C13H19NO4
Molecular Weight 253.29 g/mol
Exact Mass 253.13140809 g/mol
Topological Polar Surface Area (TPSA) 66.80 Ų
XlogP 0.10
Atomic LogP (AlogP) 0.45
H-Bond Acceptor 4
H-Bond Donor 1
Rotatable Bonds 0

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (3'S,4'S,9S,9aS)-4'-hydroxy-3'-methylspiro[2,5,6,7,8,9a-hexahydro-1H-pyrrolo[1,2-a]azepine-9,5'-oxolane]-2',3-dione

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6367 63.67%
Caco-2 + 0.6526 65.26%
Blood Brain Barrier + 0.5250 52.50%
Human oral bioavailability + 0.5429 54.29%
Subcellular localzation Mitochondria 0.6305 63.05%
OATP2B1 inhibitior - 0.8515 85.15%
OATP1B1 inhibitior + 0.9133 91.33%
OATP1B3 inhibitior + 0.9384 93.84%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior - 0.8090 80.90%
P-glycoprotein inhibitior - 0.9459 94.59%
P-glycoprotein substrate - 0.8073 80.73%
CYP3A4 substrate + 0.5581 55.81%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8294 82.94%
CYP3A4 inhibition - 0.9665 96.65%
CYP2C9 inhibition - 0.9134 91.34%
CYP2C19 inhibition - 0.8838 88.38%
CYP2D6 inhibition - 0.9544 95.44%
CYP1A2 inhibition - 0.8895 88.95%
CYP2C8 inhibition - 0.9529 95.29%
CYP inhibitory promiscuity - 0.9770 97.70%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.5239 52.39%
Eye corrosion - 0.9851 98.51%
Eye irritation - 0.9345 93.45%
Skin irritation - 0.7823 78.23%
Skin corrosion - 0.9149 91.49%
Ames mutagenesis - 0.7100 71.00%
Human Ether-a-go-go-Related Gene inhibition - 0.7488 74.88%
Micronuclear + 0.5800 58.00%
Hepatotoxicity + 0.5947 59.47%
skin sensitisation - 0.8795 87.95%
Respiratory toxicity + 0.6333 63.33%
Reproductive toxicity + 0.6778 67.78%
Mitochondrial toxicity + 0.7375 73.75%
Nephrotoxicity - 0.5711 57.11%
Acute Oral Toxicity (c) III 0.6053 60.53%
Estrogen receptor binding - 0.5000 50.00%
Androgen receptor binding + 0.6590 65.90%
Thyroid receptor binding - 0.5274 52.74%
Glucocorticoid receptor binding + 0.5391 53.91%
Aromatase binding - 0.7334 73.34%
PPAR gamma - 0.7199 71.99%
Honey bee toxicity - 0.9473 94.73%
Biodegradation - 0.5000 50.00%
Crustacea aquatic toxicity + 0.6200 62.00%
Fish aquatic toxicity - 0.6903 69.03%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 96.23% 85.14%
CHEMBL2581 P07339 Cathepsin D 94.84% 98.95%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 93.03% 91.11%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 91.88% 93.04%
CHEMBL253 P34972 Cannabinoid CB2 receptor 90.56% 97.25%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 89.83% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 89.20% 95.56%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 88.35% 96.38%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.45% 95.89%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 86.15% 99.23%
CHEMBL1871 P10275 Androgen Receptor 85.28% 96.43%
CHEMBL2781 P19634 Sodium/hydrogen exchanger 1 84.78% 90.24%
CHEMBL2140 P48775 Tryptophan 2,3-dioxygenase 84.30% 98.46%
CHEMBL3137262 O60341 LSD1/CoREST complex 83.61% 97.09%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 82.55% 90.71%
CHEMBL1806 P11388 DNA topoisomerase II alpha 81.83% 89.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 81.04% 100.00%
CHEMBL3746 P80365 11-beta-hydroxysteroid dehydrogenase 2 80.97% 94.78%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 80.38% 93.03%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Clerodendrum cyrtophyllum
Stemona tuberosa

Cross-Links

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PubChem 101449918
NPASS NPC95787
LOTUS LTS0225327
wikiData Q104985967