tricalysioside B

Details

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Internal ID c1c2bc68-edfb-483c-b3a7-28f2aca7e534
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Diterpene glycosides
IUPAC Name (1S,9R,12S,17R)-17-(hydroxymethyl)-12-methyl-17-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-8-oxapentacyclo[14.2.1.01,13.04,12.05,9]nonadec-5-en-7-one
SMILES (Canonical) CC12CCC3C(=CC(=O)O3)C1CCC45C2CCC(C4)C(C5)(CO)OC6C(C(C(C(O6)CO)O)O)O
SMILES (Isomeric) C[C@@]12CC[C@@H]3C(=CC(=O)O3)C1CC[C@]45C2CCC(C4)[C@](C5)(CO)O[C@@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO)O)O)O
InChI InChI=1S/C26H38O9/c1-24-6-5-16-14(8-19(29)33-16)15(24)4-7-25-9-13(2-3-18(24)25)26(11-25,12-28)35-23-22(32)21(31)20(30)17(10-27)34-23/h8,13,15-18,20-23,27-28,30-32H,2-7,9-12H2,1H3/t13?,15?,16-,17-,18?,20-,21+,22-,23-,24-,25+,26+/m1/s1
InChI Key GPPWDBNOAOQQHD-MCQZQAMTSA-N
Popularity 6 references in papers

Physical and Chemical Properties

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Molecular Formula C26H38O9
Molecular Weight 494.60 g/mol
Exact Mass 494.25158279 g/mol
Topological Polar Surface Area (TPSA) 146.00 Ų
XlogP 0.60
Atomic LogP (AlogP) 0.40
H-Bond Acceptor 9
H-Bond Donor 5
Rotatable Bonds 4

Synonyms

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tricalysioside B
CHEMBL1448560
HMS2268D06
SMR001215830

2D Structure

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2D Structure of tricalysioside B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8040 80.40%
Caco-2 - 0.8539 85.39%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.6286 62.86%
Subcellular localzation Mitochondria 0.8219 82.19%
OATP2B1 inhibitior - 0.7223 72.23%
OATP1B1 inhibitior + 0.8707 87.07%
OATP1B3 inhibitior + 0.9009 90.09%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.7000 70.00%
BSEP inhibitior - 0.8354 83.54%
P-glycoprotein inhibitior - 0.6439 64.39%
P-glycoprotein substrate - 0.6987 69.87%
CYP3A4 substrate + 0.6946 69.46%
CYP2C9 substrate - 0.8085 80.85%
CYP2D6 substrate - 0.8884 88.84%
CYP3A4 inhibition - 0.9710 97.10%
CYP2C9 inhibition - 0.8835 88.35%
CYP2C19 inhibition - 0.8570 85.70%
CYP2D6 inhibition - 0.9232 92.32%
CYP1A2 inhibition - 0.8313 83.13%
CYP2C8 inhibition - 0.6402 64.02%
CYP inhibitory promiscuity - 0.8961 89.61%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5709 57.09%
Eye corrosion - 0.9885 98.85%
Eye irritation - 0.9527 95.27%
Skin irritation - 0.6145 61.45%
Skin corrosion - 0.9394 93.94%
Ames mutagenesis - 0.6970 69.70%
Human Ether-a-go-go-Related Gene inhibition + 0.8299 82.99%
Micronuclear - 0.8700 87.00%
Hepatotoxicity - 0.7375 73.75%
skin sensitisation - 0.9038 90.38%
Respiratory toxicity + 0.6667 66.67%
Reproductive toxicity + 0.8333 83.33%
Mitochondrial toxicity - 0.5000 50.00%
Nephrotoxicity - 0.7454 74.54%
Acute Oral Toxicity (c) III 0.4834 48.34%
Estrogen receptor binding + 0.7118 71.18%
Androgen receptor binding + 0.6631 66.31%
Thyroid receptor binding - 0.4880 48.80%
Glucocorticoid receptor binding + 0.5584 55.84%
Aromatase binding + 0.6919 69.19%
PPAR gamma + 0.5745 57.45%
Honey bee toxicity - 0.7869 78.69%
Biodegradation - 0.6750 67.50%
Crustacea aquatic toxicity - 0.6250 62.50%
Fish aquatic toxicity + 0.9610 96.10%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.96% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.86% 97.09%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.57% 96.09%
CHEMBL5608 Q16288 NT-3 growth factor receptor 92.07% 95.89%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 90.67% 95.56%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 90.53% 96.38%
CHEMBL1994 P08235 Mineralocorticoid receptor 89.24% 100.00%
CHEMBL253 P34972 Cannabinoid CB2 receptor 86.54% 97.25%
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 86.28% 83.57%
CHEMBL221 P23219 Cyclooxygenase-1 86.02% 90.17%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 84.88% 94.00%
CHEMBL2581 P07339 Cathepsin D 83.42% 98.95%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.26% 86.33%
CHEMBL1937 Q92769 Histone deacetylase 2 82.34% 94.75%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 81.93% 94.33%
CHEMBL1806 P11388 DNA topoisomerase II alpha 81.37% 89.00%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 81.16% 95.83%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 80.89% 94.45%
CHEMBL5255 O00206 Toll-like receptor 4 80.63% 92.50%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Diplospora dubia

Cross-Links

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PubChem 24978606
LOTUS LTS0001725
wikiData Q105015043