Tinctormine

Details

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Internal ID c77a1fe1-dac2-44c7-98d0-23ce0269f763
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > C-glycosyl compounds
IUPAC Name (2E)-5-[(Z)-[3,4-dihydroxy-5-(hydroxymethyl)pyrrolidin-2-ylidene]-hydroxymethyl]-6-hydroxy-2-[(E)-1-hydroxy-3-(4-hydroxyphenyl)prop-2-enylidene]-6-[(2R,4S,5S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]cyclohex-4-ene-1,3-dione
SMILES (Canonical) C1=CC(=CC=C1C=CC(=C2C(=O)C=C(C(C2=O)(C3C(C(C(C(O3)CO)O)O)O)O)C(=C4C(C(C(N4)CO)O)O)O)O)O
SMILES (Isomeric) C1=CC(=CC=C1/C=C/C(=C\2/C(=O)C=C(C(C2=O)([C@H]3C([C@H]([C@@H](C(O3)CO)O)O)O)O)/C(=C/4\C(C(C(N4)CO)O)O)/O)/O)O
InChI InChI=1S/C27H31NO14/c29-8-13-20(35)22(37)18(28-13)19(34)12-7-15(33)17(14(32)6-3-10-1-4-11(31)5-2-10)25(40)27(12,41)26-24(39)23(38)21(36)16(9-30)42-26/h1-7,13,16,20-24,26,28-32,34-39,41H,8-9H2/b6-3+,17-14+,19-18-/t13?,16?,20?,21-,22?,23+,24?,26-,27?/m1/s1
InChI Key RFTUGGXQTAABKW-HMIXXXNSSA-N
Popularity 13 references in papers

Physical and Chemical Properties

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Molecular Formula C27H31NO14
Molecular Weight 593.50 g/mol
Exact Mass 593.17445466 g/mol
Topological Polar Surface Area (TPSA) 278.00 Ų
XlogP -2.20
Atomic LogP (AlogP) -3.68
H-Bond Acceptor 15
H-Bond Donor 12
Rotatable Bonds 6

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Tinctormine

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8046 80.46%
Caco-2 - 0.9209 92.09%
Blood Brain Barrier - 0.5879 58.79%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Mitochondria 0.5611 56.11%
OATP2B1 inhibitior - 0.5648 56.48%
OATP1B1 inhibitior + 0.8225 82.25%
OATP1B3 inhibitior + 0.9513 95.13%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior + 0.6339 63.39%
P-glycoprotein inhibitior - 0.5165 51.65%
P-glycoprotein substrate - 0.5271 52.71%
CYP3A4 substrate + 0.6376 63.76%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8359 83.59%
CYP3A4 inhibition - 0.9387 93.87%
CYP2C9 inhibition - 0.7870 78.70%
CYP2C19 inhibition - 0.8127 81.27%
CYP2D6 inhibition - 0.8859 88.59%
CYP1A2 inhibition - 0.7962 79.62%
CYP2C8 inhibition + 0.7374 73.74%
CYP inhibitory promiscuity - 0.7425 74.25%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9200 92.00%
Carcinogenicity (trinary) Non-required 0.5786 57.86%
Eye corrosion - 0.9887 98.87%
Eye irritation - 0.9234 92.34%
Skin irritation - 0.7775 77.75%
Skin corrosion - 0.9200 92.00%
Ames mutagenesis - 0.6579 65.79%
Human Ether-a-go-go-Related Gene inhibition + 0.7118 71.18%
Micronuclear + 0.8300 83.00%
Hepatotoxicity - 0.6571 65.71%
skin sensitisation - 0.7815 78.15%
Respiratory toxicity + 0.6556 65.56%
Reproductive toxicity + 0.9222 92.22%
Mitochondrial toxicity + 0.9250 92.50%
Nephrotoxicity - 0.6118 61.18%
Acute Oral Toxicity (c) III 0.5766 57.66%
Estrogen receptor binding + 0.7298 72.98%
Androgen receptor binding + 0.6634 66.34%
Thyroid receptor binding - 0.5723 57.23%
Glucocorticoid receptor binding - 0.5687 56.87%
Aromatase binding + 0.5425 54.25%
PPAR gamma + 0.7478 74.78%
Honey bee toxicity - 0.7707 77.07%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.5500 55.00%
Fish aquatic toxicity - 0.6886 68.86%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.13% 91.11%
CHEMBL2581 P07339 Cathepsin D 95.32% 98.95%
CHEMBL216 P11229 Muscarinic acetylcholine receptor M1 95.07% 94.23%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.96% 97.09%
CHEMBL2563 Q9UQL6 Histone deacetylase 5 92.40% 89.67%
CHEMBL1806 P11388 DNA topoisomerase II alpha 91.78% 89.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.38% 95.56%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 89.97% 91.71%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.33% 86.33%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.18% 94.45%
CHEMBL1937 Q92769 Histone deacetylase 2 88.47% 94.75%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 87.09% 96.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 86.73% 96.09%
CHEMBL3922 P50579 Methionine aminopeptidase 2 86.08% 97.28%
CHEMBL242 Q92731 Estrogen receptor beta 84.38% 98.35%
CHEMBL5966 P55899 IgG receptor FcRn large subunit p51 82.33% 90.93%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 81.31% 94.62%
CHEMBL3194 P02766 Transthyretin 80.54% 90.71%
CHEMBL5852 Q96P65 Pyroglutamylated RFamide peptide receptor 80.32% 85.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Carthamus tinctorius

Cross-Links

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PubChem 129636912
LOTUS LTS0241213
wikiData Q105235630