Syringetin-3-o-glucoside

Details

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Internal ID cb03aaa8-697c-4dc8-9a06-c01a4981046e
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavonoid glycosides > Flavonoid O-glycosides > Flavonoid-3-O-glycosides
IUPAC Name 5,7-dihydroxy-2-(4-hydroxy-3,5-dimethoxyphenyl)-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxychromen-4-one
SMILES (Canonical) COC1=CC(=CC(=C1O)OC)C2=C(C(=O)C3=C(C=C(C=C3O2)O)O)OC4C(C(C(C(O4)CO)O)O)O
SMILES (Isomeric) COC1=CC(=CC(=C1O)OC)C2=C(C(=O)C3=C(C=C(C=C3O2)O)O)O[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O)O)O
InChI InChI=1S/C23H24O13/c1-32-12-3-8(4-13(33-2)16(12)27)21-22(18(29)15-10(26)5-9(25)6-11(15)34-21)36-23-20(31)19(30)17(28)14(7-24)35-23/h3-6,14,17,19-20,23-28,30-31H,7H2,1-2H3/t14-,17-,19+,20-,23+/m1/s1
InChI Key JMFWYRWPJVEZPV-AVGVHVDKSA-N
Popularity 3 references in papers

Physical and Chemical Properties

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Molecular Formula C23H24O13
Molecular Weight 508.40 g/mol
Exact Mass 508.12169082 g/mol
Topological Polar Surface Area (TPSA) 205.00 Ų
XlogP 0.70
Atomic LogP (AlogP) -0.23
H-Bond Acceptor 13
H-Bond Donor 7
Rotatable Bonds 6

Synonyms

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40039-49-4
Syringetin 3-O-beta-D-glucoside
5,7-dihydroxy-2-(4-hydroxy-3,5-dimethoxyphenyl)-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxychromen-4-one
SCHEMBL4650080
CHEMBL1600723
CHEBI:192639
DTXSID001346144
HY-N8194
AKOS040760728
CCG-208439
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Syringetin-3-o-glucoside

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5074 50.74%
Caco-2 - 0.8695 86.95%
Blood Brain Barrier - 0.9000 90.00%
Human oral bioavailability - 0.6857 68.57%
Subcellular localzation Mitochondria 0.6238 62.38%
OATP2B1 inhibitior - 0.5588 55.88%
OATP1B1 inhibitior + 0.8707 87.07%
OATP1B3 inhibitior + 0.9678 96.78%
MATE1 inhibitior - 0.8400 84.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior - 0.5283 52.83%
P-glycoprotein inhibitior - 0.4776 47.76%
P-glycoprotein substrate - 0.6041 60.41%
CYP3A4 substrate + 0.6207 62.07%
CYP2C9 substrate - 0.8485 84.85%
CYP2D6 substrate - 0.8501 85.01%
CYP3A4 inhibition - 0.8862 88.62%
CYP2C9 inhibition - 0.9258 92.58%
CYP2C19 inhibition - 0.9329 93.29%
CYP2D6 inhibition - 0.9457 94.57%
CYP1A2 inhibition - 0.9089 90.89%
CYP2C8 inhibition + 0.7803 78.03%
CYP inhibitory promiscuity - 0.7195 71.95%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.7238 72.38%
Eye corrosion - 0.9897 98.97%
Eye irritation - 0.8500 85.00%
Skin irritation - 0.8305 83.05%
Skin corrosion - 0.9609 96.09%
Ames mutagenesis + 0.5400 54.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5584 55.84%
Micronuclear + 0.6733 67.33%
Hepatotoxicity - 0.5750 57.50%
skin sensitisation - 0.9389 93.89%
Respiratory toxicity + 0.6000 60.00%
Reproductive toxicity + 0.7778 77.78%
Mitochondrial toxicity - 0.5625 56.25%
Nephrotoxicity - 0.7744 77.44%
Acute Oral Toxicity (c) III 0.6799 67.99%
Estrogen receptor binding + 0.8398 83.98%
Androgen receptor binding + 0.6292 62.92%
Thyroid receptor binding - 0.5065 50.65%
Glucocorticoid receptor binding + 0.7902 79.02%
Aromatase binding + 0.5624 56.24%
PPAR gamma + 0.7014 70.14%
Honey bee toxicity - 0.7793 77.93%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.6449 64.49%
Fish aquatic toxicity + 0.7522 75.22%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.18% 91.11%
CHEMBL1806 P11388 DNA topoisomerase II alpha 96.49% 89.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 95.61% 94.00%
CHEMBL2581 P07339 Cathepsin D 95.50% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.08% 96.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 93.96% 85.14%
CHEMBL3060 Q9Y345 Glycine transporter 2 92.24% 99.17%
CHEMBL1293249 Q13887 Kruppel-like factor 5 90.03% 86.33%
CHEMBL2345 P51812 Ribosomal protein S6 kinase alpha 3 89.97% 95.64%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 89.17% 95.56%
CHEMBL3401 O75469 Pregnane X receptor 89.04% 94.73%
CHEMBL3194 P02766 Transthyretin 85.05% 90.71%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 82.47% 86.92%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 81.52% 96.00%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 80.76% 92.62%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 80.58% 96.21%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 80.51% 99.15%

Cross-Links

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PubChem 5321577
NPASS NPC226304
ChEMBL CHEMBL1600723
LOTUS LTS0167449
wikiData Q63409100