Symplocosidin

Details

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Internal ID 74b0291c-3bd2-458d-ac4d-bb8234ce5b12
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavans > Catechins
IUPAC Name (2R,3R)-2-(4-hydroxy-3-methoxyphenyl)-3,4-dihydro-2H-chromene-3,5,7-triol
SMILES (Canonical) COC1=C(C=CC(=C1)C2C(CC3=C(C=C(C=C3O2)O)O)O)O
SMILES (Isomeric) COC1=C(C=CC(=C1)[C@@H]2[C@@H](CC3=C(C=C(C=C3O2)O)O)O)O
InChI InChI=1S/C16H16O6/c1-21-15-4-8(2-3-11(15)18)16-13(20)7-10-12(19)5-9(17)6-14(10)22-16/h2-6,13,16-20H,7H2,1H3/t13-,16-/m1/s1
InChI Key NJHJXXLBWQXMRO-CZUORRHYSA-N
Popularity 8 references in papers

Physical and Chemical Properties

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Molecular Formula C16H16O6
Molecular Weight 304.29 g/mol
Exact Mass 304.09468823 g/mol
Topological Polar Surface Area (TPSA) 99.40 Ų
XlogP 0.70
Atomic LogP (AlogP) 1.85
H-Bond Acceptor 6
H-Bond Donor 4
Rotatable Bonds 2

Synonyms

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3'-Methylepicatechin
3'-O-Methyl-(-)-epicatechin
76549-34-3
3'-o-methylepicatechin
UNII-67FI825885
(2R,3R)-2-(4-hydroxy-3-methoxyphenyl)-3,4-dihydro-2H-chromene-3,5,7-triol
67FI825885
CHEBI:70254
2H-1-Benzopyran-3,5,7-triol, 3,4-dihydro-2-(4-hydroxy-3-methoxyphenyl)-, (2R,3R)-
2H-1-Benzopyran-3,5,7-triol, 3,4-dihydro-2-(4-hydroxy-3-methoxyphenyl)-, (2R-cis)-
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Symplocosidin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9467 94.67%
Caco-2 - 0.7680 76.80%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.8286 82.86%
Subcellular localzation Mitochondria 0.4849 48.49%
OATP2B1 inhibitior - 0.5831 58.31%
OATP1B1 inhibitior + 0.8037 80.37%
OATP1B3 inhibitior + 0.8668 86.68%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior - 0.7549 75.49%
P-glycoprotein inhibitior - 0.8855 88.55%
P-glycoprotein substrate - 0.8987 89.87%
CYP3A4 substrate + 0.5183 51.83%
CYP2C9 substrate - 0.6107 61.07%
CYP2D6 substrate + 0.6005 60.05%
CYP3A4 inhibition - 0.7213 72.13%
CYP2C9 inhibition - 0.6813 68.13%
CYP2C19 inhibition + 0.6338 63.38%
CYP2D6 inhibition - 0.7274 72.74%
CYP1A2 inhibition - 0.5814 58.14%
CYP2C8 inhibition + 0.5834 58.34%
CYP inhibitory promiscuity - 0.5079 50.79%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.5544 55.44%
Eye corrosion - 0.9861 98.61%
Eye irritation + 0.6752 67.52%
Skin irritation - 0.6870 68.70%
Skin corrosion - 0.9130 91.30%
Ames mutagenesis - 0.6700 67.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4654 46.54%
Micronuclear + 0.7759 77.59%
Hepatotoxicity - 0.6125 61.25%
skin sensitisation - 0.8863 88.63%
Respiratory toxicity - 0.5000 50.00%
Reproductive toxicity + 0.8778 87.78%
Mitochondrial toxicity + 0.6500 65.00%
Nephrotoxicity - 0.6205 62.05%
Acute Oral Toxicity (c) III 0.5758 57.58%
Estrogen receptor binding - 0.5395 53.95%
Androgen receptor binding + 0.5264 52.64%
Thyroid receptor binding + 0.6108 61.08%
Glucocorticoid receptor binding + 0.5998 59.98%
Aromatase binding - 0.4894 48.94%
PPAR gamma + 0.5761 57.61%
Honey bee toxicity - 0.8666 86.66%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.5500 55.00%
Fish aquatic toxicity - 0.4330 43.30%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.23% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.78% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.30% 95.56%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.04% 97.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 89.66% 85.14%
CHEMBL2535 P11166 Glucose transporter 89.40% 98.75%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.31% 86.33%
CHEMBL3438 Q05513 Protein kinase C zeta 88.59% 88.48%
CHEMBL4208 P20618 Proteasome component C5 85.46% 90.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 84.94% 89.00%
CHEMBL2581 P07339 Cathepsin D 84.90% 98.95%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 84.18% 99.15%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 83.72% 94.45%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 83.45% 97.14%
CHEMBL3194 P02766 Transthyretin 83.36% 90.71%
CHEMBL5608 Q16288 NT-3 growth factor receptor 82.38% 95.89%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 81.60% 94.00%
CHEMBL3060 Q9Y345 Glycine transporter 2 80.63% 99.17%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Lindera umbellata
Parapiptadenia rigida
Tetradium ruticarpum

Cross-Links

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PubChem 11420256
NPASS NPC16435
ChEMBL CHEMBL2297044
LOTUS LTS0256821
wikiData Q27138594