Songbaisine

Details

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Internal ID 39047206-7399-40d0-85d6-7a7732e2b369
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal alkaloids > Jerveratrum-type alkaloids
IUPAC Name (3S,3'S,3'aS,4aS,6'S,6aS,6bS,7'aS,9S,11aS,11bS)-3-hydroxy-3',6',10,11b-tetramethylspiro[1,2,3,4,4a,5,6,6a,6b,7,8,11a-dodecahydrobenzo[a]fluorene-9,2'-3a,4,5,6,7,7a-hexahydro-3H-furo[3,2-b]pyridine]-11-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C27H41NO3/c1-14-11-21-24(28-13-14)16(3)27(31-21)10-8-19-20-6-5-17-12-18(29)7-9-26(17,4)23(20)25(30)22(19)15(27)2/h14,16-21,23-24,28-29H,5-13H2,1-4H3/t14-,16-,17-,18-,19-,20-,21-,23+,24-,26-,27+/m0/s1
InChI Key YQGYDJYDIWCHOB-SZKIHVIJSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C27H41NO3
Molecular Weight 427.60 g/mol
Exact Mass 427.30864417 g/mol
Topological Polar Surface Area (TPSA) 58.60 Ų
XlogP 3.70
Atomic LogP (AlogP) 4.26
H-Bond Acceptor 4
H-Bond Donor 2
Rotatable Bonds 0

Synonyms

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142631-45-6
RefChem:184326
Songbaisine A
Songbaisine B
(3S,3'S,3'aS,4aS,6'S,6aS,6bS,7'aS,9S,11aS,11bS)-3-hydroxy-3',6',10,11b-tetramethylspiro[1,2,3,4,4a,5,6,6a,6b,7,8,11a-dodecahydrobenzo[a]fluorene-9,2'-3a,4,5,6,7,7a-hexahydro-3H-furo[3,2-b]pyridine]-11-one

2D Structure

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2D Structure of Songbaisine

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9900 99.00%
Caco-2 + 0.5465 54.65%
Blood Brain Barrier + 0.5250 52.50%
Human oral bioavailability + 0.5286 52.86%
Subcellular localzation Mitochondria 0.6033 60.33%
OATP2B1 inhibitior - 0.7206 72.06%
OATP1B1 inhibitior + 0.8263 82.63%
OATP1B3 inhibitior + 0.9585 95.85%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.5811 58.11%
BSEP inhibitior - 0.4596 45.96%
P-glycoprotein inhibitior - 0.5230 52.30%
P-glycoprotein substrate + 0.5000 50.00%
CYP3A4 substrate + 0.7053 70.53%
CYP2C9 substrate - 0.7688 76.88%
CYP2D6 substrate - 0.8070 80.70%
CYP3A4 inhibition - 0.9521 95.21%
CYP2C9 inhibition - 0.9101 91.01%
CYP2C19 inhibition - 0.9121 91.21%
CYP2D6 inhibition - 0.9230 92.30%
CYP1A2 inhibition - 0.9045 90.45%
CYP2C8 inhibition - 0.6057 60.57%
CYP inhibitory promiscuity - 0.9087 90.87%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.4961 49.61%
Eye corrosion - 0.9885 98.85%
Eye irritation - 0.9499 94.99%
Skin irritation - 0.7014 70.14%
Skin corrosion - 0.9133 91.33%
Ames mutagenesis - 0.7345 73.45%
Human Ether-a-go-go-Related Gene inhibition + 0.6645 66.45%
Micronuclear - 0.6000 60.00%
Hepatotoxicity + 0.5375 53.75%
skin sensitisation - 0.7682 76.82%
Respiratory toxicity + 0.6889 68.89%
Reproductive toxicity + 0.9667 96.67%
Mitochondrial toxicity + 0.9125 91.25%
Nephrotoxicity + 0.5000 50.00%
Acute Oral Toxicity (c) III 0.6302 63.02%
Estrogen receptor binding + 0.7062 70.62%
Androgen receptor binding + 0.7377 73.77%
Thyroid receptor binding + 0.6250 62.50%
Glucocorticoid receptor binding + 0.8289 82.89%
Aromatase binding + 0.6853 68.53%
PPAR gamma - 0.5190 51.90%
Honey bee toxicity - 0.7273 72.73%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity + 0.5100 51.00%
Fish aquatic toxicity + 0.6611 66.11%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3137262 O60341 LSD1/CoREST complex 94.58% 97.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 94.11% 94.45%
CHEMBL253 P34972 Cannabinoid CB2 receptor 91.93% 97.25%
CHEMBL241 Q14432 Phosphodiesterase 3A 91.33% 92.94%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 90.50% 99.23%
CHEMBL1937 Q92769 Histone deacetylase 2 90.18% 94.75%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 90.14% 91.11%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 89.77% 89.05%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 89.57% 96.09%
CHEMBL1871 P10275 Androgen Receptor 89.36% 96.43%
CHEMBL1994 P08235 Mineralocorticoid receptor 88.86% 100.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 87.42% 95.56%
CHEMBL5966 P55899 IgG receptor FcRn large subunit p51 86.92% 90.93%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 84.65% 93.03%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 82.39% 93.04%
CHEMBL3038469 P24941 CDK2/Cyclin A 81.56% 91.38%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 81.01% 92.88%
CHEMBL221 P23219 Cyclooxygenase-1 80.38% 90.17%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 80.12% 96.38%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Fritillaria unibracteata

Cross-Links

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PubChem 197469
NPASS NPC145029